Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g0453 ATGGGTAGAAGAAAGTGTTCACATTGTGGTAACATAGGACATAATTGTAGGACATGCACATCCTTCACCACAAAGCTTATAGGACTTCGTCTCTTTGGTGTCCAACTATCCTCATCATCATTATCATCATCTAATACCATCATCAAGAAAAGCTTTAGCATGGACACTTTTCCCTCACCATCCTCTTCATCTTCTTCATTCTCTTCATCAACCATTCCTGATAATCATCATCATCATAAATCCGCCTCTAATCTTGCCTATCTATCCGATTGCTTTATAGGTCCATCCCAAGAGAGGAAGAAAGGAGTTCCATGGACGGAAGAAGAGCATAGAATATTTCTCGTTGGATTAGAAAAGCTTGGAAAAGGAGATTGGAGAGGTATCTCTAAAAACTTCGTCACTACAAGAACTCCTACACAAGTCGCAAGTCATGCTCAAAAATACTTTCTCCGATTAGCAACTATCAATAACAAGAAACGACGTTCAAGTCTCTTTGACTTGGTTGGGAGCAAGAACACCAAAAGAGAAGGACAAGGTAATAAATTAGAGGATACAAAGTGTGAATGTGAAGTTGAAAAAGAAGAAGAAGAAGCCAAATTAGAAAAGCAAGAAATTAATTACTCTAAAGTTAATTGGCTACATAATCATCATTCTTCAAATTATGTAGCAGTGCCTAATTTGGACCTTACACTTGCTGTTACACCCCCTAAGGTTAATCAACCCTCTCCAGCTGGCCCATTTCTTCTAGGCCCAATAAGGGTCACTTAA 768 0.3867 MGRRKCSHCGNIGHNCRTCTSFTTKLIGLRLFGVQLSSSSLSSSNTIIKKSFSMDTFPSPSSSSSSFSSSTIPDNHHHHKSASNLAYLSDCFIGPSQERKKGVPWTEEEHRIFLVGLEKLGKGDWRGISKNFVTTRTPTQVASHAQKYFLRLATINNKKRRSSLFDLVGSKNTKREGQGNKLEDTKCECEVEKEEEEAKLEKQEINYSKVNWLHNHHSSNYVAVPNLDLTLAVTPPKVNQPSPAGPFLLGPIRVT* 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g0453 255 ProSiteProfiles SANT domain profile. 105 153 IPR017884 -
Psa7g0453 255 ProSiteProfiles Myb-like domain profile. 97 149 IPR001005 -
Psa7g0453 255 CDD SANT 104 149 IPR001005 -
Psa7g0453 255 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 3 210 - -
Psa7g0453 255 SMART sant 101 151 IPR001005 -
Psa7g0453 255 Pfam Myb-like DNA-binding domain 104 149 IPR001005 -
Psa7g0453 255 SUPERFAMILY Homeodomain-like 98 153 IPR009057 -
Psa7g0453 255 Gene3D - 103 156 - -
Psa7g0453 255 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 100 151 IPR006447 GO:0003677
Psa7g0453 255 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 97 153 IPR017930 -
Psa7g0453 255 PANTHER TRANSCRIPTION FACTOR KUA1 3 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g0453 Psa-Chr7 31225773 31227718 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Psa7g0453 Myb_DNA-binding 9.5e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g0453 - - cam:101500241 266.159
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g0453 7 31225773 31227718 Psa7g0453 7 31225773 31227718 ECH