Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g0419 ATGATGAATAAGATGACCAGCTCTGATCTCATAGATTCTAAGCTCGAAGAACATCAGTTATGTGGATCCAAACACTGTCCTCGCTGCGGTCACAAGTTCGATCAAGGCAAACCGGATTGGTTAGGTCTACCAGCAGGAGTGAAATTTGATCCAACAGATCAAGAACTCATTGAACATCTCGAAGCGAAAGTTGAATCAAAGAACAATATGAAATCACATCCTTTGATCGATGAATTCATTCTCACTATTGAAGGTGAAGATGGAATTTGTTACACCCATCCTGAAAAACTTCCAGGAGTGACAAGAGATGGATTAAGCAGACACTTTTTCCATAGACCATCAAAGGCATATACAACGGGAACACGAAAGAGACGAAAGATTCAAACCGAAGAATGCGATTTACAAGGAACAGGTTCAGGAGGAGAAACAAGATGGCACAAAACTGGAAAAACAAGACCTGTTATGGTTAATGGAAAACAAAAAGGCTGCAAGAAGATTCTAGTCCTGTACACCAATTTCGGGAAGAATCGAAAACCGGAGAAGACGAATTGGGTTATGCATCAGTATCATCTAGGACAACATGAAGAAGAGAAAGAAGGAGAGCTTGTTGTTTCGAAGATATTTTATCAGACACAGCCAAGACAGTGTAATTGGTCTGATAATAATCATAGAATTGGTGCAACAACAACGATAACCGGTGAAGGAAGTGGTGGTGAGCCTAGTAATATAATCAATGCAAGAAGAGATAGTGGAAGTGGAAGTTCTTCTTCTAAGGAGATTGCAACTCATCATAATCATAATCATAGTCATATTTATAGAGACGAAATGTCTGCTGCTGCTGCCGCCGCTGTTGCTGTTGGTGTCCCGACTCCTTTAACAAGCTTCACAAACGCTTTGGATATTCAACATCTTAAATCTGATCATTTCGGCTTCATCCCATTTCGGAAAAACAGCTTCGATGAGGTTGGAATAGGAGAAGGTTCTACAGCAAGAGAAATGCAAGCATCAGGCTCATGTGATCAGGAGCAGCATCATGTAGTAACACATCATCATCAACAACATCAACATGAGCATCACCAACAAATTAATGCAAACGCAGCTTTCCATATAAGTAGGCCTTCAAATCCAATCTCAACTATCATCTCTCCACCTCCACTTCACCATACATCCATCATCCTTGATGATAATTCTTACCATGTCTCAACAATCATGCTCCAAAATGAAAATTTCCAGCAACAACAACAGCAGCAACAACATCATAAACTAGGTGGTGGAAGGTCTGCATCTGGTTTGGAAGAAGTCATCATGGGTTGCACTTCAACATCTTCTGATACTATCAAAGAGGAATCATCCATGAGAAACCAGCAAGAAGCAGAATGGTTGAAATACTCTTCTTATTGGCCAGTTGACCCTCCTCAAGACAACCATCATCATCATCATCATCAACATCATGATCAATAG 1461 0.4045 MMNKMTSSDLIDSKLEEHQLCGSKHCPRCGHKFDQGKPDWLGLPAGVKFDPTDQELIEHLEAKVESKNNMKSHPLIDEFILTIEGEDGICYTHPEKLPGVTRDGLSRHFFHRPSKAYTTGTRKRRKIQTEECDLQGTGSGGETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGKNRKPEKTNWVMHQYHLGQHEEEKEGELVVSKIFYQTQPRQCNWSDNNHRIGATTTITGEGSGGEPSNIINARRDSGSGSSSSKEIATHHNHNHSHIYRDEMSAAAAAAVAVGVPTPLTSFTNALDIQHLKSDHFGFIPFRKNSFDEVGIGEGSTAREMQASGSCDQEQHHVVTHHHQQHQHEHHQQINANAAFHISRPSNPISTIISPPPLHHTSIILDDNSYHVSTIMLQNENFQQQQQQQQHHKLGGGRSASGLEEVIMGCTSTSSDTIKEESSMRNQQEAEWLKYSSYWPVDPPQDNHHHHHHQHHDQ* 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g0419 486 Pfam No apical meristem (NAM) protein 44 191 IPR003441 GO:0003677|GO:0006355
Psa7g0419 486 ProSiteProfiles NAC domain profile. 43 210 IPR003441 GO:0003677|GO:0006355
Psa7g0419 486 PANTHER NAC DOMAIN-CONTAINING PROTEIN 75 3 456 - -
Psa7g0419 486 SUPERFAMILY NAC domain 39 210 IPR036093 GO:0003677|GO:0006355
Psa7g0419 486 Gene3D NAC domain 52 214 IPR036093 GO:0003677|GO:0006355
Psa7g0419 486 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 3 456 IPR044799 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g0419 Psa-Chr7 29007734 29012332 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g0419 4 467 NAC Transcription Factor Family AT5G56620 50.625 6.34e-137 399
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Psa7g0419 NAM 1.5e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g0419 - - mtr:MTR_8g102240 738.799
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g0419 7 29007734 29012332 Psa7g0419 7 29007734 29012332 ECH