Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g0397 ATGTCAAACATGAATCCAATTTTCTATGTTTTAGTACTTGTTCTTGTTCTACAAAATCCTATTGAAACACAATGTCACACCAAAGGCCTTCGACCAAAACCTTATAATGGAAATGGAACCTCTCCAAACATGACCAAAGTTCAAGAATCAGAACAACAGTTCATGAAATGGGTGATATTTGTTGGTGGTCTCAAACACACAGTTTTCCGAACAGCAAAAAACAAGCTTTTTCCTTCTTACACTTTGAATGTCTATAAGAATTCCAAAAAAGGAGGCTTCTCATCGATTCAATCAGCCATTGATTCTCTTCCGTTCATCAACCTAGTTAGAGTCGTCATTAAGGTTCACGAAGGTGTTTACACAGAGAAAGTTTATATTCCGCCATTAAAATCATTCATAACAATACAAGGAGCAGGTGCAGATAAAACAATTGTTCAATGGGGTGACACTGCTCAAACACCTAATCCTGCTGCAAAAGGACAAACATTAGGAACATATGGTTCTGCAACTTTTGCTGTTAATTCACCTTATTTCATTGCTAAGAACATCACATTCAAAAACACTGCTCCAATTCCAGCACCAGGAGCAGTTGGAAAACAAGGTGTGGCATTGAGGATTTCAGCTGATAATGCAATGTTTCTTGGATGCAAATTTTTAGGAGCACAAGATACACTCTATGATCATCTTGGTAGACATTATTACAAAGATTGTTATATTGAAGGCTCTGTTGATTTCATATTCGGCAATGCTCTCTCTCTTTTTGAGGGTTGTCACGTGCATGCGATAGCAGAGAATACAGGGGCAGTAACAGCACAAGGAAGGAGCAGTATATTGGAAGACACGGGATTCTCATTTGTACACTGTAAGGTCACGGGATCAGGGGCACTATACCTTGGAAGGGCTTGGGGTCCTTTTTCTAGAGTTGTCTTTGCTTATACATACATGGACAATATCATCATTCCCAAAGGATGGTATAATTGGGGTGATCCCAATCGTGAAATGACTGTATTCTATGGACAATACAAATGCACAGGAGCAGGAGCAAGCTATGCAGGGAGAGTATCATGGTCAAGGGAACTCACTGATGAAGAAGCTAAACCTTTTATTTCACTTAGCTATATTGATGGCTCTGAATGGATTAATTCTTTCTTTTGA 1155 0.3896 MSNMNPIFYVLVLVLVLQNPIETQCHTKGLRPKPYNGNGTSPNMTKVQESEQQFMKWVIFVGGLKHTVFRTAKNKLFPSYTLNVYKNSKKGGFSSIQSAIDSLPFINLVRVVIKVHEGVYTEKVYIPPLKSFITIQGAGADKTIVQWGDTAQTPNPAAKGQTLGTYGSATFAVNSPYFIAKNITFKNTAPIPAPGAVGKQGVALRISADNAMFLGCKFLGAQDTLYDHLGRHYYKDCYIEGSVDFIFGNALSLFEGCHVHAIAENTGAVTAQGRSSILEDTGFSFVHCKVTGSGALYLGRAWGPFSRVVFAYTYMDNIIIPKGWYNWGDPNREMTVFYGQYKCTGAGASYAGRVSWSRELTDEEAKPFISLSYIDGSEWINSFF* 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g0397 384 ProSitePatterns Pectinesterase signature 2. 239 248 IPR033131 -
Psa7g0397 384 Pfam Pectinesterase 88 376 IPR000070 GO:0030599|GO:0042545
Psa7g0397 384 Gene3D - 80 383 IPR012334 -
Psa7g0397 384 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 3 383 - -
Psa7g0397 384 PANTHER PECTINESTERASE 3 383 - -
Psa7g0397 384 SUPERFAMILY Pectin lyase-like 78 382 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g0397 Psa-Chr7 27204319 27208660 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g0397 93 380 Carbohydrate Esterase AT5G47500 50.173 1.47e-99 298
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g0397 K01051 - gmx:100802832 673.315
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g0397 7 27204319 27208660 Psa7g0397 7 27204319 27208660 ECH