Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g0396 ATGGGTAGAACAATAAGGTGGTTCAAGAATTTGTTTGGGATAAAGAAAGATAGAGATAATTCAAATTCGAACTTGAATTCGAATTCTTCCAGTACTAAATGGAATTCTCCTCTTGAAACTTTCTCCAAGAGAGATTCAAGAGGTTTGTGTCATAATCCAGCTACTATACCGCCTAACATTTCGCCTGCGGAAGCGGCTTGGGTTCAATCCTTCTACTCAGAATCCGAGAAGGAGCAAAACAAGCACGCCATTGCTGTTGCAGCTGCCACAGCAGCAGCCGCAGATGCTGCTGTGGCAGCTGCTCAAGCTGCCGTGGCTGTTGTTAGACTAACCAGCCACGGCAGAGATACCATGTTTGGTGGCGGACACCAGAAATTCGCTGCTGTCAAGATTCAAACCACATTTAGAGGCTACTTGGCAAGAAAAGCACTAAGAGCCTTAAAGGGGTTGGTGAAGTTACAAGCACTGGTGAGAGGGTACTTAGTGAGGAAGCAAGCAACAGCAACACTTCACAGTATGCAAGCTTTGATTAGAGCTCAAGCAACAGTGAGGTCACATAAATCTCGTGGACTCGCGATGAACACGAAGAATGAAACACATAACAGATTTCAAACACAAGCAAGAAGATCCATGGAAAGGTACAATCACAATGAGAGTAATAGGAATGAGTACACATCTTCAACTCCAATCCACAGTAGAAGATTATCATCTTCTTTTGATGCTACTGTCAGCGGCAACAATAACGGCAACAACAACAATTATGATATTGGAAGTCCAAAAATAGTAGAAATTGATACTGGAAGACCAAAATCAAGGTCGAGAAGAAGCAACACATCAATTTCCGATTTTGGCGACGACCCGTCATTTCAAGCACTTTCATCTCCACATCCAATTATCCCATCTCAGTTATTCATTCCAAATCAAAGGAGTTTCATTGAATCAGATTGGGGAATAACAGGGGAAGAATGCAGATTTTCAACCGCGCAAAGCACTCCGCGCTTCACAAGTTCGTGTAGTTGTGGATTTGTTGCACCTTCTACACCTAAAACAATTTGTGGAGATAGTTTCTACATTGGTGAATATGGTAATTATCCTAACTACATGGCTAATACACAGTCTTTTAAGGCTAAATTGAGGTCTCATAGTGCTCCAAAGCAACGACCCGAACCGGTTCCTAAGAAGAGGCTTACATTGAATGAACTCATGGAATCTAGAAACAGTTTGAGTGGAGTTAGAATGCAAAGATCTTGTTCACAGATTCAGGATGCTATCAATTTTAAGAATGCTGTTATGAGTAAGTTAGACAAATCCACTGATTTCGATAGAAACTACTCGAACCAAAGGAGGTGGTGA 1353 0.4183 MGRTIRWFKNLFGIKKDRDNSNSNLNSNSSSTKWNSPLETFSKRDSRGLCHNPATIPPNISPAEAAWVQSFYSESEKEQNKHAIAVAAATAAAADAAVAAAQAAVAVVRLTSHGRDTMFGGGHQKFAAVKIQTTFRGYLARKALRALKGLVKLQALVRGYLVRKQATATLHSMQALIRAQATVRSHKSRGLAMNTKNETHNRFQTQARRSMERYNHNESNRNEYTSSTPIHSRRLSSSFDATVSGNNNGNNNNYDIGSPKIVEIDTGRPKSRSRRSNTSISDFGDDPSFQALSSPHPIIPSQLFIPNQRSFIESDWGITGEECRFSTAQSTPRFTSSCSCGFVAPSTPKTICGDSFYIGEYGNYPNYMANTQSFKAKLRSHSAPKQRPEPVPKKRLTLNELMESRNSLSGVRMQRSCSQIQDAINFKNAVMSKLDKSTDFDRNYSNQRRW* 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g0396 450 Pfam IQ calmodulin-binding motif 151 165 IPR000048 GO:0005515
Psa7g0396 450 Pfam IQ calmodulin-binding motif 127 145 IPR000048 GO:0005515
Psa7g0396 450 Gene3D - 122 175 - -
Psa7g0396 450 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 438 - -
Psa7g0396 450 MobiDBLite consensus disorder prediction 188 207 - -
Psa7g0396 450 ProSiteProfiles IQ motif profile. 124 152 IPR000048 GO:0005515
Psa7g0396 450 MobiDBLite consensus disorder prediction 213 232 - -
Psa7g0396 450 ProSiteProfiles IQ motif profile. 148 175 IPR000048 GO:0005515
Psa7g0396 450 PANTHER IQ-DOMAIN 5-RELATED 1 438 - -
Psa7g0396 450 SMART iq_5 146 167 IPR000048 GO:0005515
Psa7g0396 450 SMART iq_5 123 145 IPR000048 GO:0005515
Psa7g0396 450 Pfam Protein of unknown function (DUF4005) 332 410 IPR025064 -
Psa7g0396 450 MobiDBLite consensus disorder prediction 246 284 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g0396 Psa-Chr7 27159699 27162501 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g0396 1 413 IQD Protein Family AT3G16490 48.449 7.82e-95 289
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g0396 - - mtr:MTR_8g102400 729.939
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g0396 7 27159699 27162501 Psa7g0396 7 27159699 27162501 ECH