Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g0389 ATGGAGCGTTTGGACGATTCAGAAGAGCAACTCGAACGAGTTGACTCTGATCAGTTAACATTGACAAGCTCTGGTTCAGGCATTTCGTCTATATTCAGCGCTGACGATTTCCGTAACTTCAACGGTTCCGGTGACATTTCCTCTATCAGCAGTGGCTCAGGTGAGATTCCGATATTTACGGTGAATCGAGTGATTCTTGCACCTTCGTTGATCGCTGAGAAGTATGAAGGTGACAGCAACAGCAACAAGGCTGACGTGACGGCGGCGAGGGAGAAGTGCGTCGGAAGGAACAACAAGGGAGTGAGTTGGGGATATACTTCAGTGATTGGGAGACGGAACGAAATGGAGGATGATGTAGCTGTTATTCCAGGATTTTTATCACGCACTTGCGATCACGTTGGTGGTTGTACGGCTCCCGGTTCTAGATCCTCCGGTAAGATCAGTCCTGTTCATTTCTTCGGCGTTTACGACGGACACGGTGGCTCTCAGGTTGCTAAATTTTGTGCCAAGCGGATGCATGATATTATAGCAGAGGAATGGGACCGAGAAATAGCCGGTGGTGCTGAATGGCAGAAAAGATGGAAAGCTGTATTTGCTAATGGCTTTGAGAGGACTGACAGTGAAATCGAATCAGAAGCAGTTGCACCAGAAATGGTTGGATCTACTGCCTCTGTGGTTGTTCTATCTGGTTGTCAAATTATTACATCCAACTGTGGCGACTCAAGGGTGGTTCTTTGCCGCAGGACTCAAACACTCCCATTGACAGTAGATCAGAAGCCTGACAGAGAGGACGAACTCTTGAGAATTGAAGGAGAAGGAGGAAAAGTAATAAACTGGAATGGAGCTAGGGTGTTTGGTGTACTTGCCATGTCCAGGGCCATAGGTGATCGGTACTTGAGACCATGGATTATTCCGGTGCCAGAGATAACTTTTACAGCAAGAACAGACGAGGATGAGTGTTTAATTTTGGCAAGTGATGGACTTTGGGATGTAATGACGAATGATGAAGTGGGAGAAGTAGCACGCCACCTTCTAAGAAGGCGCCGCAGATCCTTGTCAACAGAGGAAATATCCCCAACACAAGTTGTTGCAGATAGACTCACTGAAATTGCAATTAGTAGAAATAGTAAAGATAACATTTCAATCATAGTTATTGATCTGAAATCGAATAGAAAACGTCTGCAAAGGCCTGCTTCAATTTCCCAAGAACACGATTGA 1218 0.4581 MERLDDSEEQLERVDSDQLTLTSSGSGISSIFSADDFRNFNGSGDISSISSGSGEIPIFTVNRVILAPSLIAEKYEGDSNSNKADVTAAREKCVGRNNKGVSWGYTSVIGRRNEMEDDVAVIPGFLSRTCDHVGGCTAPGSRSSGKISPVHFFGVYDGHGGSQVAKFCAKRMHDIIAEEWDREIAGGAEWQKRWKAVFANGFERTDSEIESEAVAPEMVGSTASVVVLSGCQIITSNCGDSRVVLCRRTQTLPLTVDQKPDREDELLRIEGEGGKVINWNGARVFGVLAMSRAIGDRYLRPWIIPVPEITFTARTDEDECLILASDGLWDVMTNDEVGEVARHLLRRRRRSLSTEEISPTQVVADRLTEIAISRNSKDNISIIVIDLKSNRKRLQRPASISQEHD* 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g0389 405 PANTHER PROTEIN PHOSPHATASE 2C 6-RELATED 56 396 - -
Psa7g0389 405 Pfam Protein phosphatase 2C 139 380 IPR001932 -
Psa7g0389 405 ProSitePatterns PPM-type phosphatase domain signature. 152 160 IPR000222 GO:0043169
Psa7g0389 405 Gene3D - 91 397 IPR036457 -
Psa7g0389 405 SUPERFAMILY PP2C-like 95 388 IPR036457 -
Psa7g0389 405 SMART PP2C_4 91 385 IPR001932 -
Psa7g0389 405 ProSiteProfiles PPM-type phosphatase domain profile. 102 387 IPR001932 -
Psa7g0389 405 PANTHER ALPHABET, ISOFORM E-RELATED 56 396 - -
Psa7g0389 405 CDD PP2Cc 104 387 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g0389 Psa-Chr7 26687498 26692296 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g0389 103 397 PP2C-type Phosphatase Gene Family AT4G26080 52.381 7.15e-103 310
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g0389 K14497 - gmx:100782634 596.66