Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g0363 ATGGGAGAGTTACCTCTACTTGGTTTTGGTTCAGAGAAGGAAGCAACTGCTAATACGGAGCCCCGTTTACCCGACCCGGTTCAAAACAAACCCAAACGGCCCAGAGATAGTAACAACAGCAACCACCCGGTTTACAGAGGCGTCCGGATGCGGGCTTGGGGAAAATGGGTATCCGAAATCCGCGAGATACCCGACCCGGTTCAAAACAAACCCAAACGGCCCAGAGATAGTAACAACAGCAACCACCCGGTTTACAGAGGCGTCCGGATGCGGGCTTGGGGAAAATGGGTATCCGAAATCCGCGAGCCGCGAAAAAAGAATCGGATCTGGCTCGGGACGTTCGCGACGCCGGAAATGGCGGCTCGAGCTCATGACGTGGCAGCTCTCGCTATCAAAGGAAACTCAGCTATCCTCAACTTCCCTGAACTGGCACCGTCAATGCCTCGGCCTGAATCGAAATCTCCTCGCGACGTTCAAGCCGCCGCCGTAAAAGCCGCTGCCATGGAAGTTCCCGATCAACAAACAACAACATCGCAATCCCAGTCGCAGTCGCATACTTTCTCTTCTTCTTCCTCCTCTTCGCTGTCGCAATCATCATCGTCGTCTTCGTTGGCGGTTTCGTCTTCCGACGAACCGTCAACGCCAGACGAACTCGGTGAAATAGTGGAACTACCACCATTGGGAACAAGTTTTGAATTACCCGACCCGGTTAATATGGTATTTTCCGACCCGGTTGATGGATGGCCTTATTATTCGCACAGTTGGGATCAGATTTCAATGCATCAAGACAACTCTGAAAGTATAAGTATGATTCTTTGTGGTTTTGAGGGTTCATTATGGCAGCATTAA 849 0.5124 MGELPLLGFGSEKEATANTEPRLPDPVQNKPKRPRDSNNSNHPVYRGVRMRAWGKWVSEIREIPDPVQNKPKRPRDSNNSNHPVYRGVRMRAWGKWVSEIREPRKKNRIWLGTFATPEMAARAHDVAALAIKGNSAILNFPELAPSMPRPESKSPRDVQAAAVKAAAMEVPDQQTTTSQSQSQSHTFSSSSSSSLSQSSSSSSLAVSSSDEPSTPDELGEIVELPPLGTSFELPDPVNMVFSDPVDGWPYYSHSWDQISMHQDNSESISMILCGFEGSLWQH* 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g0363 282 MobiDBLite consensus disorder prediction 170 214 - -
Psa7g0363 282 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 3-LIKE 73 264 - -
Psa7g0363 282 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 3-LIKE 30 62 - -
Psa7g0363 282 SMART rav1_2 84 147 IPR001471 GO:0003700|GO:0006355
Psa7g0363 282 ProSiteProfiles AP2/ERF domain profile. 84 141 IPR001471 GO:0003700|GO:0006355
Psa7g0363 282 MobiDBLite consensus disorder prediction 65 79 - -
Psa7g0363 282 ProSiteProfiles AP2/ERF domain profile. 44 73 IPR001471 GO:0003700|GO:0006355
Psa7g0363 282 Pfam AP2 domain 83 133 IPR001471 GO:0003700|GO:0006355
Psa7g0363 282 MobiDBLite consensus disorder prediction 64 83 - -
Psa7g0363 282 CDD AP2 85 143 IPR001471 GO:0003700|GO:0006355
Psa7g0363 282 MobiDBLite consensus disorder prediction 1 45 - -
Psa7g0363 282 PRINTS Ethylene responsive element binding protein signature 45 56 IPR001471 GO:0003700|GO:0006355
Psa7g0363 282 PRINTS Ethylene responsive element binding protein signature 107 123 IPR001471 GO:0003700|GO:0006355
Psa7g0363 282 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 73 264 - -
Psa7g0363 282 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 30 62 - -
Psa7g0363 282 Gene3D AP2/ERF domain 84 142 IPR036955 GO:0003700|GO:0006355
Psa7g0363 282 SUPERFAMILY DNA-binding domain 84 142 IPR016177 GO:0003677
Psa7g0363 282 MobiDBLite consensus disorder prediction 147 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g0363 Psa-Chr7 24714963 24716615 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g0363 68 264 AP2-EREBP Transcription Factor Family AT5G11590 55.721 5.27e-55 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Psa7g0363 AP2 5.8e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g0363 K09286 - gmx:100778201 258.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g0363 7 24714963 24716615 Psa7g0363 7 24714963 24716615 ECH