Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g0354 ATGTTTAGAAAAAATGGAAACTCCGTTAGAGTTATGGCATCTGGGAACGTGTCTTCATCACTAACTGCTTCTTCACCGGAAAACGTACTCGAATGGGTCAAACAAGATAAAAGAAGAATGCTTCATGTTGTTTATCGTGTTGGCGACTTGGATAGAACCATTAAATTCTATACTGAGTGCCTTGGAATGAAGCTCCTTAGAAAGCGTGACATACCGGAGGAGAAATATACCAATGCTTTTCTTGGATATGGACCTGAAGACTCACACTTTGTTATTGAACTCACATACAATTACGGAGTTGAGAAGTATGATATTGGAACTGGATTTGGCCATTTTGGTATTGCCGTTGATGATATTACAAAAACAGTGGAACTAATAAGAGTTAAGGGGGGCAAAATATCTAGAGAACCTGGTCCTGTCAAAGGAGGCAAAACAGTAATTGCATTTATTGAGGATCCTGATGGTTACAAATTTGAACTTTTGGAAAGAGGCCCGACTCCTGAGCCATTGTGCCAAGTGATGCTTCGAGTGGGTGATCTTAACCGTTCAATCGAGTTTTATGAGAAGGCTTTTGGTATGGAGCTGCTTCGAACACGAGATAATCCAGAGAACAAGTATACCATAGCAATGCTGGGTTATGGTCCAGAAGATAAAACTACTGTTCTGGAGTTGACATACAATTATGGAGTCACTGAATATGATAAAGGAAATGCTTATGCTCAGATCGCAATAGGTACAGATGATGTGTACAAAACTGCCGAAGCAATTAAACTATCCACCGGAAAGGTTACTCGGGAACCTGGACCATTGCCTGGTATCAACACAAAAATTACTGCATGCTTGGATCCCGATGGATGGAAGACGGTTTTTGTAGATAATATTGATTTTCTTAAGGAGTTGGAGTAG 906 0.4029 MFRKNGNSVRVMASGNVSSSLTASSPENVLEWVKQDKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVEKYDIGTGFGHFGIAVDDITKTVELIRVKGGKISREPGPVKGGKTVIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLNRSIEFYEKAFGMELLRTRDNPENKYTIAMLGYGPEDKTTVLELTYNYGVTEYDKGNAYAQIAIGTDDVYKTAEAIKLSTGKVTREPGPLPGINTKITACLDPDGWKTVFVDNIDFLKELE* 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g0354 301 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 172 287 IPR004360 -
Psa7g0354 301 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 40 160 IPR004360 -
Psa7g0354 301 ProSitePatterns Glyoxalase I signature 1. 172 193 IPR018146 GO:0004462|GO:0046872
Psa7g0354 301 PANTHER LACTOYLGLUTATHIONE LYASE CHLOROPLASTIC-RELATED 7 301 - -
Psa7g0354 301 Gene3D - 166 301 IPR029068 -
Psa7g0354 301 PANTHER LACTOYLGLUTATHIONE LYASE 7 301 - -
Psa7g0354 301 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 170 293 IPR029068 -
Psa7g0354 301 Gene3D - 11 164 IPR029068 -
Psa7g0354 301 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 169 293 IPR037523 -
Psa7g0354 301 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 38 168 IPR029068 -
Psa7g0354 301 ProSitePatterns Glyoxalase I signature 1. 42 63 IPR018146 GO:0004462|GO:0046872
Psa7g0354 301 CDD GlxI_Ni 40 161 - -
Psa7g0354 301 ProSitePatterns Glyoxalase I signature 2. 106 118 IPR018146 GO:0004462|GO:0046872
Psa7g0354 301 TIGRFAM glyox_I: lactoylglutathione lyase 28 172 IPR004361 GO:0004462|GO:0046872
Psa7g0354 301 TIGRFAM glyox_I: lactoylglutathione lyase 170 293 IPR004361 GO:0004462|GO:0046872
Psa7g0354 301 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 39 163 IPR037523 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g0354 Psa-Chr7 23576559 23582048 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g0354 172 290 Calmodulin-binding Proteins AT1G08110 27.586 3.86e-09 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g0354 K01759 - gmx:100775714 572.778
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g0354 7 23576559 23582048 Psa7g0354 7 23576559 23582048 ECH
Psa7g0354 7 23576559 23582048 Psa1g1038 1 71626507 71630366 PCT