Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g0346 ATGGGGGAAGGTGAGGGAAGTGATATCCCTCCTAAAAACCTACTGTTTGATTCCGTTTCGGCTTCGAATTCGAAGAAGCTTGCTAGGCAGCTCGATTTCAACAATTTTGGTGGGACTCAGGTGACTGTGTCTTTGCCGGAACAATCGCAGCCTCCGGCGACACTGCCTCCTCTTCCTTCAGCCAAATTGGGGAAACCAGAATCTCCGAAGTCAAAATCAAGACCCAACTCTGAGGCAAAAGATGCTACTCCAAAGAAGCAAAAACAGTGCAATTGTAAACATTCAAAATGCTTAAAGCTATATTGTGAATGTTTTGCGTCGGGAATATATTGTGATGGTTGCAACTGTGTAAATTGTTTTAACAACGTTGACAATGAAGCTGCTAGACGAGAAGCTGTTGAAGCAACTTTAGAACGCAATCCAAATGCTTTTAGGCCGAAAATTGCAAGCAGCCCTCATGGAACACGCGATAACAGGGAGGAGGCTGGGGAAGTTTTAATATTGGGAAAGCACAACAAGGGGTGCCATTGTAAAAAATCTGGGTGCCTCAAGAAGTACTGTGAATGTTTCCAAGCCAACATTCTTTGTTCTGAAAATTGTAAATGCATGGACTGCAAAAATTTTGAAGGAAGTGAAGAGCGGCAAGCTTTGTTCCATGGAGATCAAAACAATAATATGGTGTTTATTCAGCAAGCAGCCAATGCTGCCATAACTGGAGCTATTGGTTCCTCTGGTTATTCATCACCACCAGTATCGAGAAAAAGAAAAGGTTCAGAACTCTGGCCGTCCGTCAAGGATCCATCTGTTAGCAAGCTGGGACAACAGGCAAATCCTGTCAGAGGTCCTGGAGCACCCTCCTCATCCTTGTCTCCTGTCCCAGTTCCTCGTGTTGGAACTTCATCATTAGGCCCTTCAAAATTTATGTACAGGTCTCTTTTAGCAGACATCATACAACCACAGCACCTGAAAGAGCTGTGCTCTGTTCTAGTGCTAGTAGCTGGACAAGCCACTAAAACACTTACAGACCAGAAAAATTTAATTGATAAGCACACAGAAGATCGGACAGAAACTTCTCTTGCTTCTTCATATCAAGAGCAAATGCCAAATCAAAAGGAAGCTGATGTTGAGAAAGCTATGGCTGATGATTGTTCTAGTGCAAACCAAACTGATAAAACCAGTCCGGAAAATTCCAGTTCAGAAGGTGTTGATGTTTCAAAAGGGAGGCCAATGTCTCCTGGAACTCTAGCATTGATGTGTGATGAGCAAGATACAATGTTCATGACTGCGGCCCCCTCTATTGGGTCAATGGCCCATGCTTGCAACACATCTTCACAATTGCCTCGTGGACAAGGAGCAACAGAAGTCTATGCAGAGCAAGAAAGAATTGTATTGACGAAATTCAGAGATTTTCTTAATAGGGTTATAACTATGGGAGAAATAAATGAAACAAAGTGTTCTTCATTAGCCAGAAGTGAGTTAGAGGTTCAAAAGGAGCCAATCATCAAGAGCACTCAAAATGCCAGTACTGAGGCAGCACAGCAGCAGGGACTGGAAGCTACCAGCAATGGTGTTGCCAAAGTTGTCAGCAACCCCGCCACTTCAACATCTTTGGTCCCTTGTAGTCTTGTTGGGGAAATTAAGCCGAAGGTTGAAAAATAG 1659 0.4358 MGEGEGSDIPPKNLLFDSVSASNSKKLARQLDFNNFGGTQVTVSLPEQSQPPATLPPLPSAKLGKPESPKSKSRPNSEAKDATPKKQKQCNCKHSKCLKLYCECFASGIYCDGCNCVNCFNNVDNEAARREAVEATLERNPNAFRPKIASSPHGTRDNREEAGEVLILGKHNKGCHCKKSGCLKKYCECFQANILCSENCKCMDCKNFEGSEERQALFHGDQNNNMVFIQQAANAAITGAIGSSGYSSPPVSRKRKGSELWPSVKDPSVSKLGQQANPVRGPGAPSSSLSPVPVPRVGTSSLGPSKFMYRSLLADIIQPQHLKELCSVLVLVAGQATKTLTDQKNLIDKHTEDRTETSLASSYQEQMPNQKEADVEKAMADDCSSANQTDKTSPENSSSEGVDVSKGRPMSPGTLALMCDEQDTMFMTAAPSIGSMAHACNTSSQLPRGQGATEVYAEQERIVLTKFRDFLNRVITMGEINETKCSSLARSELEVQKEPIIKSTQNASTEAAQQQGLEATSNGVAKVVSNPATSTSLVPCSLVGEIKPKVEK* 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g0346 552 MobiDBLite consensus disorder prediction 67 85 - -
Psa7g0346 552 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 5 ISOFORM X1 52 530 - -
Psa7g0346 552 MobiDBLite consensus disorder prediction 42 85 - -
Psa7g0346 552 MobiDBLite consensus disorder prediction 382 404 - -
Psa7g0346 552 PANTHER TESMIN/TSO1-RELATED 52 530 IPR028307 -
Psa7g0346 552 ProSiteProfiles CRC domain profile. 86 210 IPR005172 -
Psa7g0346 552 MobiDBLite consensus disorder prediction 268 284 - -
Psa7g0346 552 MobiDBLite consensus disorder prediction 347 409 - -
Psa7g0346 552 MobiDBLite consensus disorder prediction 246 295 - -
Psa7g0346 552 SMART CXC_2 170 211 IPR033467 -
Psa7g0346 552 SMART CXC_2 85 125 IPR033467 -
Psa7g0346 552 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 87 122 IPR005172 -
Psa7g0346 552 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 173 207 IPR005172 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g0346 Psa-Chr7 23291511 23298400 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g0346 1 494 CPP Transcription Factor Family AT4G29000 57.038 0.0 570
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Psa7g0346 TCR 2.9e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g0346 - - gmx:100786353 822.772