Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g0344 ATGGGGACGGAGCATCCATCCAAGAGTTGGAGCATCCATACCCGATCGGAGATCATCGCCAAGTACAAAGTCATGGAACGGATCGGCTCCGGAGCTTACGCCGACGTCTACCGCGGCCGTCGTCTCTCCGACGACCTAACAGTCGCTCTCAAGGAAATCCACGACTACCAATCCGCTTTCCGAGAAATCGAAGCGTTGCAGATGCTTCAAGGCTCTTCAAACGTCATCGTCATGCACGAGTACTTCTGTCGCGAAGATGAAGACGCGGTTCTCGTGCTTGAGTATCTTACCACCGATTTGGCAACCGTTATTTCCAATGCTGCCAAGGAAGGTTTTCCACTTCCTGTTGGTGAGATGAAACGTTGGATGATTCAGATTATTTCTGGTCTTGACGCTTGTCACCGGAATATGATTGTTCATCGTGATTTGAAACCTTCTAATCTCTTGATTTCGGATAGTGGTGTTCTCAAATTGGCTGATTTTGGACAGGCAAGGATACTCACCGAACCTGGATTTGATGCTTTTGAAGGGAATCCACCACCATGCGAGCATGATGGTTCTAATCATGAAAGTTCACTTCATCACCCTGAAGCTTCTCTTCTCACCGACAACTTAAGTCAATTTGGATGTGGAAATCAAGAGCAAGGAAGCAGTCATAATGAGTATTTTAGTGTTTTAGATGAGCTGAAAACAAAGAGATCCGTGGATGACATTGAAAAGGATACAAACATTCCAGATGGAAACACTTCTTGTCTTGCAACGTGCACAACAAGTGATATGGATAATGATCCTATGAGAACTTCTTTTAGTTTTGAAGCACTGGAGGAGGAAGATAAAGAACATGGTGGTTTCACATCATGTGTTGGAACTCGTTGGTTCCGGGCTCCTGAGTTGCTTTACGGATCCATAAACTATGGTTTAGAAATTGATCTCTGGTCACTTGGCTGTATTTTTGCAGAGCTTTTGACTCTGAAACCCTTGTTTCCCGGAACAGCTGATATTGACCAGCTCAGCAAAATTATTAATGTTTTGGGCAACCTTGATGAGAGAGCTTGGCCTGGCTGCTCAGAACTTCCTGATTACAGAATAATCTCGTTTAGCAAGGTAGAAAACCCTCCTGGTGTTGAAGCCTGCCTGCCCAACCGCTCAGCCGATGAAGTATCTCTTGTTAAAAACCTGGTTTGTTATGATCCGGCTAGGAGGGCTACAACAATGGAGCTACTCCAGGACAAGTACTTTAACGAAGAACCTCTTCCTGTTCCCATTTCTGAGTTGCGAGTTCCTCTGACTAGAAATACAGAAGATGAGGATTCTATGGGTGGGTGGCAGGATTACAATGACATGGGTTCTGATTCTGATTTCGATGACTTTGGCCCTATGAATTTCACCAGAACTGACACCGGTTTCTCCATACAGTTTCCTTGA 1425 0.4505 MGTEHPSKSWSIHTRSEIIAKYKVMERIGSGAYADVYRGRRLSDDLTVALKEIHDYQSAFREIEALQMLQGSSNVIVMHEYFCREDEDAVLVLEYLTTDLATVISNAAKEGFPLPVGEMKRWMIQIISGLDACHRNMIVHRDLKPSNLLISDSGVLKLADFGQARILTEPGFDAFEGNPPPCEHDGSNHESSLHHPEASLLTDNLSQFGCGNQEQGSSHNEYFSVLDELKTKRSVDDIEKDTNIPDGNTSCLATCTTSDMDNDPMRTSFSFEALEEEDKEHGGFTSCVGTRWFRAPELLYGSINYGLEIDLWSLGCIFAELLTLKPLFPGTADIDQLSKIINVLGNLDERAWPGCSELPDYRIISFSKVENPPGVEACLPNRSADEVSLVKNLVCYDPARRATTMELLQDKYFNEEPLPVPISELRVPLTRNTEDEDSMGGWQDYNDMGSDSDFDDFGPMNFTRTDTGFSIQFP* 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g0344 474 SUPERFAMILY Protein kinase-like (PK-like) 10 433 IPR011009 -
Psa7g0344 474 ProSitePatterns Serine/Threonine protein kinases active-site signature. 138 150 IPR008271 GO:0004672|GO:0006468
Psa7g0344 474 PANTHER CYCLIN-DEPENDENT KINASE 10 13 432 - -
Psa7g0344 474 ProSiteProfiles Protein kinase domain profile. 22 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g0344 474 Pfam Protein kinase domain 280 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g0344 474 Pfam Protein kinase domain 22 172 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g0344 474 Gene3D Transferase(Phosphotransferase) domain 1 246 427 - -
Psa7g0344 474 ProSitePatterns Protein kinases ATP-binding region signature. 28 51 IPR017441 GO:0005524
Psa7g0344 474 Gene3D Transferase(Phosphotransferase) domain 1 11 197 - -
Psa7g0344 474 PANTHER CELL DIVISION PROTEIN KINASE 13 432 - -
Psa7g0344 474 SMART serkin_6 22 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g0344 Psa-Chr7 23221786 23226345 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g0344 4 474 Core Cell Cycle Gene Families AT4G28980 62.134 0.0 598
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CCRK Psa7g0344 Pkinase 6.6e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g0344 - - mtr:MTR_8g103240 843.958