Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g0339 ATGAAAGGTAAGGAAGAAAAGAAAAGAAAAGAGAGTAAACAAAAGACAAAAGGTTCTAAAACTCCATCATTATTATCATTTCAAATTCTCCTCAAAAACAATATACAACCAAACAACAATAGTGTTCCTCTCCTTTCCCTCTATAGCTACTTAACCAACTTCAACAACAACAACAATAACAAAACCACCTCTCAAAGTTTCTACCAAAGCATGAATAGAACTCTTCATCTTCAAACCTCACCAGTGCAACAACAAATGATGGCTGGAAACCCTAATAACTGGTGGAACCCTCCTGCAGCACCTGATCATCTTCCACCTCCTTCCAATTACTTTCTATCTCCTTATCCTACTTCATCTTCTCTTCCTCTTCCTCTTCCTCTTCCTTCATGGCATGAAAATCAACAACTTCCTGAAAACTCATGGACTCAACTTCTCATGAGCGGCGGCGTGGTGTATGAAGAAGATAAGGAACAAGTTATGCTAACTCAGCCTCCTCTTGTTGATCATGTAAAACATGAAAGCTCAGTGAACAACTATGTCTATGGAAATGAAGAGTTTCATGGAACAACAAATTCTACTTGGTCTCAAATAGTGTCGGTGCCTTCTTCTTCTTCCTCCAAATCCAACATGTTGGATTTCTCTAACAGTACAAGATCTCCATCATCAGATCCATCTTCTGATCAGTGTAATAGTGGTGCAGCTGGTGGGGCATTGAAGAAAGCTAGGGTTCAACCATCTACAACTCAGTCTACCTTCAAGGTTAGGAAGGAGAAGTTAGGTGATAGAATTACAGCCCTTCATCAACTTGTTTCTCCATTTGGAAAGACTGACACAGCATCTGTCTTATTAGAATCTATTGGTTATATAAGATTCCTTCATGGTCAAATTGAGGCACTTAGTTTACCCTACTTGGGAAATGCATCATCAAACATCATCAAGAACCAACAGCAACAATCTGTTCAAGGTGAGAAAAGTTGTTTCTTCCCTGAACATCCTGGTCAGCTGGTGAATGAAAATTGTTTGAAAAGAAAAGCTGTTAGTGAGGGTTGTGAAGATGAAGAAGAAAAGAAGGATTTGAGGAGTAGAGGATTGTGTTTGGTTCCAGTTTCATGCACAGTGCAAGTTGGAAGTGATACTGGAGCTGATTATTGGGCACCTGCTTTTGGTGCTGGATTTCAGTAG 1182 0.3959 MKGKEEKKRKESKQKTKGSKTPSLLSFQILLKNNIQPNNNSVPLLSLYSYLTNFNNNNNNKTTSQSFYQSMNRTLHLQTSPVQQQMMAGNPNNWWNPPAAPDHLPPPSNYFLSPYPTSSSLPLPLPLPSWHENQQLPENSWTQLLMSGGVVYEEDKEQVMLTQPPLVDHVKHESSVNNYVYGNEEFHGTTNSTWSQIVSVPSSSSSKSNMLDFSNSTRSPSSDPSSDQCNSGAAGGALKKARVQPSTTQSTFKVRKEKLGDRITALHQLVSPFGKTDTASVLLESIGYIRFLHGQIEALSLPYLGNASSNIIKNQQQQSVQGEKSCFFPEHPGQLVNENCLKRKAVSEGCEDEEEKKDLRSRGLCLVPVSCTVQVGSDTGADYWAPAFGAGFQ* 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g0339 393 MobiDBLite consensus disorder prediction 208 232 - -
Psa7g0339 393 PANTHER OS05G0228400 PROTEIN 93 379 - -
Psa7g0339 393 MobiDBLite consensus disorder prediction 1 21 - -
Psa7g0339 393 MobiDBLite consensus disorder prediction 208 250 - -
Psa7g0339 393 CDD bHLH_AtbHLH_like 251 300 IPR045239 -
Psa7g0339 393 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 93 379 - -
Psa7g0339 393 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 253 303 IPR036638 GO:0046983
Psa7g0339 393 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 243 292 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g0339 Psa-Chr7 23151124 23153873 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g0339 71 335 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G29100 37.360 3.70e-44 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g0339 - - gmx:100785156 330.487
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g0339 7 23151124 23153873 Psa7g0339 7 23151124 23153873 ECH