Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g0334 ATGTCTGTGCCATTAGAACAAGGCTATGGTGGTGGTGAGGTTCCTTCAATGGAAGCCACTGAGAGGAACATTGGATTGAACCTCAAAGCTACTGAACTGAGGCTTGGGTTACCTGGCTCTGAGTCACCAGAGAGAGAAAATGGTGGGTTGTCCATGCTCAAGTGTTTGGTGTCTGGAGCTAAGAGGGGGTTCTCTGATGCTATTGATGGAGGTTCTGGGCAATGGGTTGTCTCTGGAAATGGTGGATCTGAAGTGGGGTTGTGTAAAGATGGAAACTTGTTTTCTCCTAAAGGGAAAAATGGTGTTGGTGTTGAATGCAATAACCAACAGAATCTTTTTTCTGCAACAGTTGTTAAAGAAACTGTTCCTCACTCTCCTAAGACCTTGCATGAGAATAATAAACCACAGATTTCTCCTCCTTCTGCTAAGGCGCAGGTTGTAGGATGGCCACCAATCCGATCTTTCAGGAAGAACTCAATGGTTACTCCGCCTCAAAAGAACGATGCTGATGCAGAAGCCAAATCTGAATGTCTCTATGTAAAAGTTAGCATGGAAGGTGCACCCTACTTGCGGAAAGTGGATCTGAATGGTTTTAGCTCTTACAGGGAACTTTCTTCCGCACTCGAAAAGATGTTCAGTTGTTTTACAATCAGTCAATGCGGCTCATACGGGGTTTCTAGTCAAGAAAAAACTTTAAGCGAGAGTAGATTGGTGGATCTTCTTCATGGTTCAGAATATGTGCTAACCTATGAAGACAAGGACGGTGACTGGATGCTAGTCGGTGATGTTCCGTGGGAGATGTTCACCGAGTCTTGCAAGAGGCTGAGGATAATGAAGAGTTCCGAAGCAATCGGGCTAGCACCTCGAGCCATGGAAAAGTGCAAAAGTCGGAACTAG 897 0.4526 MSVPLEQGYGGGEVPSMEATERNIGLNLKATELRLGLPGSESPERENGGLSMLKCLVSGAKRGFSDAIDGGSGQWVVSGNGGSEVGLCKDGNLFSPKGKNGVGVECNNQQNLFSATVVKETVPHSPKTLHENNKPQISPPSAKAQVVGWPPIRSFRKNSMVTPPQKNDADAEAKSECLYVKVSMEGAPYLRKVDLNGFSSYRELSSALEKMFSCFTISQCGSYGVSSQEKTLSESRLVDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTESCKRLRIMKSSEAIGLAPRAMEKCKSRN* 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g0334 298 Pfam AUX/IAA family 31 289 IPR033389 -
Psa7g0334 298 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 18 291 IPR003311 GO:0005634|GO:0006355
Psa7g0334 298 PANTHER AUXIN-INDUCED PROTEIN 18 291 - -
Psa7g0334 298 SUPERFAMILY CAD & PB1 domains 175 279 - -
Psa7g0334 298 ProSiteProfiles PB1 domain profile. 177 280 IPR000270 GO:0005515
Psa7g0334 298 Gene3D - 171 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g0334 Psa-Chr7 22514057 22517157 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g0334 180 288 B3 DNA Binding Superfamily AT4G23980 30.275 4.79e-09 55.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Psa7g0334 AUX_IAA 7.7e-85 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g0334 K14484 - gmx:100803754 431.795