Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g0329 ATGGAGCGTATCGTTGGCGGCAACTACAAGCTCGGCCGCAAGATCGGAAGTGGATCGTTCGGTGAAATCTACCTTGCTACGCATATTGATACCTTTGAAATCGTCGCTATCAAGATTGAGAATAGTAAAACAAAGCATCCCCAACTACTTTACGAGGCAAAGCTCTACAATGTTCTTCAAGGAGGAAGTGGCATTCCAAGCATAAAATGGTTTGGCGTTGATGGGGAGGATAACGTACTTGCCATTGATTTGCTTGGTCCTAGTCTTGAAGATCTTTTTGTGTATTGTGGAAGGAAGTTTTCATTGAAGACTGTGTTATTGTTAGCTGATCAAATGATTACTAGAATAGAATATGTGCACTCTAAAGGATATTTACATAGGGATATTAAACCGGATAACTTCCTCATGGGACTTGGTCGGAAAGCCAACCAGGTTTACATAATCGATTTTGGGCTGGCAAAACGGTATCGGGATTCCACGAGCAATCGCCACATTCCTTACAGGGAGAACAAAAACTTAACAGGGACTGCTCGATATGCCAGTTGCAATACTCATCTTGGGATTGAGCAAAGTAGACGGGATGATTTGGAATCACTAGGATATGTACTTCTGTACTTCCTTAGAGGAAGCCTTCCTTGGCAAGGTTTAAGGGCTGCAACAAAGAAACAGAAGTATGATAAGATATGTCAGAAGAAGGTATCAACTCCTATCGAGGTACTATGCAAATCTCATCCCGTAGAGTTTGCTTCATACTTCCATTACTGCCACTCGTTGACGTTTGATCAACGGCCTGATTATGGATTCTTGAAGCGCCTATTTAGAGACCTATTTGCCCAGGAAGGTTATGAGTTTGATTTCGTTTTTGATTGGACCATTTTAAAGTATCAGCAATCACAGAAGCAAAGAGTGACACCTTCCTTATCTCCAGTTCCCGGGGCAAGTAACAATCGTGCAATCCCAATGGATGTTGATAACCATCAAGGGCACGGTGAAGAACGAATTAAATCAGGAAACGCTACTGGTTCTGGTGTTAAAGTTCAGTTTAAATCACCAACTGGTAGAAACTTGAGTTCTGATAACCCTCTTGACAAGAATATTTTCGGAGAAGCAAATATGCCCTCTACTTCGCATTCTCCTGCTGGTACTTCAAAAAGGAACCCCTTGAATCCTGCCTTGTCTGCCGAACCTTCTAACCCTCGACATGGGCAAGGGATTAAAATCGGCCCTTCAAGTAGCTGGATGTCATCTCTGCAGCGCATATCTTCTTCCAAATGA 1275 0.4267 MERIVGGNYKLGRKIGSGSFGEIYLATHIDTFEIVAIKIENSKTKHPQLLYEAKLYNVLQGGSGIPSIKWFGVDGEDNVLAIDLLGPSLEDLFVYCGRKFSLKTVLLLADQMITRIEYVHSKGYLHRDIKPDNFLMGLGRKANQVYIIDFGLAKRYRDSTSNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLRAATKKQKYDKICQKKVSTPIEVLCKSHPVEFASYFHYCHSLTFDQRPDYGFLKRLFRDLFAQEGYEFDFVFDWTILKYQQSQKQRVTPSLSPVPGASNNRAIPMDVDNHQGHGEERIKSGNATGSGVKVQFKSPTGRNLSSDNPLDKNIFGEANMPSTSHSPAGTSKRNPLNPALSAEPSNPRHGQGIKIGPSSSWMSSLQRISSSK* 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g0329 424 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Psa7g0329 424 PANTHER CASEIN KINASE-RELATED 1 399 - -
Psa7g0329 424 Pfam Protein kinase domain 9 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g0329 424 MobiDBLite consensus disorder prediction 340 361 - -
Psa7g0329 424 Gene3D Transferase(Phosphotransferase) domain 1 1 334 - -
Psa7g0329 424 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Psa7g0329 424 MobiDBLite consensus disorder prediction 374 424 - -
Psa7g0329 424 SUPERFAMILY Protein kinase-like (PK-like) 4 290 IPR011009 -
Psa7g0329 424 MobiDBLite consensus disorder prediction 404 424 - -
Psa7g0329 424 MobiDBLite consensus disorder prediction 334 361 - -
Psa7g0329 424 PANTHER CASEIN KINASE 1-LIKE PROTEIN 3 1 399 - -
Psa7g0329 424 MobiDBLite consensus disorder prediction 374 393 - -
Psa7g0329 424 SMART serkin_6 9 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g0329 424 ProSiteProfiles Protein kinase domain profile. 9 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g0329 Psa-Chr7 22361641 22369976 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g0329 9 215 EF-hand Containing Proteins AT4G23650 29.577 2.47e-13 69.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Psa7g0329 Pkinase 1e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g0329 K08960 - gmx:100800342 771.926