Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g0322 ATGGATTTAGAAGAGAAGTTCCTTGCCAAAGTTTCTGGTGTTCAAAGCCTTTCTTCCAGTGTGCAAAGTACTCCAGAAAAAAATGGACATTCAGATGATGCTTCGAGAAGTTCAGAACTCCTTCAGGAATTCATGAAACATGGTCCAAAAAAGGAACTTCTTCAAACGTGCTTTGATAAGGACAAAAAGAACACATCTTCGAAAAACAGAATGACTGAAGGAAAGTCATCTGGTAAGGTAATTAAGAAACACGACACAAAAAAGGCTTCTAGTCTTAGTCGTCAGTCCTCAAAAAAACAAAATCGGAAGGGTGAAAACCCCATCCGACTCATACCACCCCCTGACGAGGATTCTGATTTTGGACATCTGAGCACTTGGATCTGTAAGAATGCTGCTTGTAGGGCGGTTCTATCAATGGATGACACATTTTGTAGGCGATGTTCTTGTTGTATCTGTCACCTTTTTGATGATAACAAGGATCCTAGTCTTTGGTTAGTATGCACATCTGAATCTACTCTAGGGGACTCCTGTGGATTGTCTTGCCATATCGAATGTGCCCTTCAACATGAAAAAGTGGGAGTTGTTGATCATGGGCAACTGATGCAACTGGATGGTGGTTATTGCTGCGCGTCCTGTGGTAAAGTTACTGGGATACTCGGATGCTGGAAGAAACAGCTAAATATTGCAAAAGATGCCCGGCGTGTAGATGTACTCTGTTATAGGATATATTTGAGCTACAGGCTTCTGAATGGAACTTCAAAATTCAAAGACCTGCATCAAATGGTTCAGGAGGCAAAGGCTAAACTGGAGACAGAAGTTGGTCCTCTTGACGGAGTTTCTGCCAAAATGGCACGAGGCATTGTCAGCAGACTCCCTATTGCCAGTGATGTGCAGAGACTCTGCACTCTTGCTATTGAGAAAGCTGATAGCTGGCTGGCCACTGTTACCAATTTAAATCCAGAGGGTTCACTTCCTGCTGCTTGCAAGTTTGTTTTTGAAGAGGTAACAACTTCCTCTGTCAAAATCATTTTGATTGAAATGTCAAGTATATGTTCCGAGGACATTAAGGGGTACAAGCTCTGGTATTACAAGAGTCGGGATGAGCCACACACAAAGGATCCTGTTTCCGTGTTTCCCAAATCTCAGAGGAGGATTTTGATATCCGACCTTCAACCTTGCACGGAATATACTTTTCGAATTGTATCTTACACTGATATGGGTGACCTGGGTCATTCCGAGGCTAAGTGTTTCACTAAGAGCATCGAAATAGTTCAACATAAAATCAAGTTTGTTGCTTCGAATCATAAAAAACTGAACCCTCACTCAGGGGGAGATTTTTCCGCAATCACAGGCCCCAGATTTAAGGTTCAAGACCTTGGGAAAATTTTGCGTCTTGCTTGGGCTCAAGAACGTGGTTACTTTGAGGAGTGTTGCTCCGCTGATATGAAAAATTGCTGCGGTCAAGGTGAAATGAACAAGCCTAAAATTTCAGAAACCTGGTTTCCTTCAGATTCGCGAGGCCTTGATTTAAATGTCGTTTCAGTCCCTGATTTGAATGAAGACCTAACACCTCCTTTTGAATCTTCCAGAGATGAAGGTATTGGTTGCACTTTACTGCAGGCTGTAGAGGCAGCTGATGATGCTGCTTCTCATGACCTACAGAAAAATGATTTAGCAAGATCACATAGGAGTGGCGACTCACAAACCTGGGCTCATGGCCCAAGAGAAGTCTCCGCTGTTGATTCCCGTGTATATGCTGCAGGCAGGAAAAGGGCTGCGAGCACAAATGAAGAAGGATATGACTGCGACAGCACTTTAATAAATGGTTCTCCTTTACGTATGCCTGTTGGTTCACGTTCCTTGGATGAAAACTTTGAGTATTGTGTGAAAGTAATCCGTTGGCTAGAGTGTGAGGGTCACATCAAACAGGAGTTTCGGTTGAAATTGCTAACATGGTTTAGTTTGAGATCAACAGAACAGGAACGCAGGGTGGTAAATACCTTCATTCAAACTCTGATGGACGATCCAAGTAGTTTGGCAGGGCAACTGGTCGACTCTTTCTCTGATATTGTATCCAGCAAGAGGCCAAGAAATGGATTCAGTAGTAAAGCCGGGGCATCAAAATAA 2127 0.4311 MDLEEKFLAKVSGVQSLSSSVQSTPEKNGHSDDASRSSELLQEFMKHGPKKELLQTCFDKDKKNTSSKNRMTEGKSSGKVIKKHDTKKASSLSRQSSKKQNRKGENPIRLIPPPDEDSDFGHLSTWICKNAACRAVLSMDDTFCRRCSCCICHLFDDNKDPSLWLVCTSESTLGDSCGLSCHIECALQHEKVGVVDHGQLMQLDGGYCCASCGKVTGILGCWKKQLNIAKDARRVDVLCYRIYLSYRLLNGTSKFKDLHQMVQEAKAKLETEVGPLDGVSAKMARGIVSRLPIASDVQRLCTLAIEKADSWLATVTNLNPEGSLPAACKFVFEEVTTSSVKIILIEMSSICSEDIKGYKLWYYKSRDEPHTKDPVSVFPKSQRRILISDLQPCTEYTFRIVSYTDMGDLGHSEAKCFTKSIEIVQHKIKFVASNHKKLNPHSGGDFSAITGPRFKVQDLGKILRLAWAQERGYFEECCSADMKNCCGQGEMNKPKISETWFPSDSRGLDLNVVSVPDLNEDLTPPFESSRDEGIGCTLLQAVEAADDAASHDLQKNDLARSHRSGDSQTWAHGPREVSAVDSRVYAAGRKRAASTNEEGYDCDSTLINGSPLRMPVGSRSLDENFEYCVKVIRWLECEGHIKQEFRLKLLTWFSLRSTEQERRVVNTFIQTLMDDPSSLAGQLVDSFSDIVSSKRPRNGFSSKAGASK* 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g0322 708 MobiDBLite consensus disorder prediction 12 28 - -
Psa7g0322 708 Pfam PHD - plant homeodomain finger protein 128 246 IPR032881 -
Psa7g0322 708 PANTHER VIN3-LIKE PROTEIN 1 55 703 - -
Psa7g0322 708 MobiDBLite consensus disorder prediction 556 575 - -
Psa7g0322 708 Pfam Fibronectin type III domain 330 410 IPR003961 GO:0005515
Psa7g0322 708 PANTHER VIN3-LIKE PROTEIN 2-RELATED 55 703 IPR044514 GO:0010048|GO:0040029
Psa7g0322 708 MobiDBLite consensus disorder prediction 29 115 - -
Psa7g0322 708 SUPERFAMILY Fibronectin type III 330 408 IPR036116 GO:0005515
Psa7g0322 708 Gene3D Immunoglobulins 325 421 IPR013783 -
Psa7g0322 708 MobiDBLite consensus disorder prediction 1 115 - -
Psa7g0322 708 CDD FN3 329 408 IPR003961 GO:0005515
Psa7g0322 708 CDD PHD_VIN3_plant 148 212 - -
Psa7g0322 708 ProSiteProfiles Fibronectin type-III domain profile. 324 423 IPR003961 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g0322 Psa-Chr7 22101587 22107608 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g0322 86 699 PHD Gene Family AT3G24440 49.600 0.0 534
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g0322 - - gmx:100816128 1135.17