Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g0321 ATGACAAGTCGAGTAAAGGATGATGAGAAAAATGAACGAATTATTCGAGGTCTCCTCAAACTTACACAGAATCGAAGATGCATTAATTGCAATAGCTTGGGACCGCAATATGTATGCACAAATTTCTGGACGTTTGTTTGCACAAGCTGTAGTGGAATACACCGAGAATTTACTCATAGAGTAAAATCAGTTTCCATGGCTAAATTTACTGCACAAGAAGTTAGTGCACTTCAAGAAGGAGGAAATCAGCATGCAAAAGAAATATTCTTTAAAGAATGGGATCCGCAAACTCATTCTTTACCTGATAGCAACAATGTTGACAGGCTTCGGGACTTTATCAAGCATGTTTATGTAGATAAGAGATTCACTGGCGAGAAGTCCTATGATAAACCTCCAAGAGCACAGGGCGACAAAGATGATTCCTATGAAAACAGGAGAATGGAGACATATCAGGGAGGACGTAAAAGCCCTCCCTATGAGGACACATATGAACGTCGTTACAGTGACAGGTCTAGTCCAGGTGGAAGAAGTCCTGGCTATGATAAAAGAAGCCCTGGTCGCCCTCCAATAATCAACGACTGGCGTCGTGAAGATAGATTTGGGGATGGAAAGAAATTTGAAGATCGTAAAATATCCGATGGAGGTAATAAGATGGAAAGTCAATCTCCTGAGCGAGCCAACGACCCGGGGTCTTCAAGCCCACTACCTGTTGTCAGACCTGTTAGAGAAATTTTGGGAGAAAATGTAGTACCTCTACGAATTAGTGAACCTCCCAAAGCAAACAGCGGACAGGCTGCTAATGGCTCAGGAATCACACAGAGAACGGCGTCTTCCGGTAGTTTGGCATCCAGTAATGGAACCCAAACAGAAGTTAAGCTTGAGACTATCAGGAGCCTTATTGATTTTGATGATATTCCTGAACCACCTATTGCTCCAGCAATTCCTCAAGCCACACCAGTTACCGTGGCTCAACTTGCGAATCCAACAAGTTCTGCATATCAGGGTCTTTCAAATGTAAATCCGCTTGAATCTATGCTGTCCCAGTTGTCTGTTCCATCATCCTTACCTGCTCATGTTTCTGGAGCCCAAGGGCCTTTGGCAGGATCAGCTCCAGCTGCGGGCAACTTCACAACTTTCCCAGCCAGTGTTGCTTCATCAACACCTTCTGGATTGACAACGGCATCACCTTTCAATAATGCAGGCCCGTGGCATAGTTTGCAGTATCAGCAACCGCAACCTTTGTTCACATCTACTGTTGGCCAGTCTACTATTCAACAATCTACCCCACCAGTAAATGGAGCTTTCAATTATCAGGGGCATCCAAGCACCTTAGTGCCACATGCGGCAAATGTTGTCAATGAGGAAAAATATAGTGTTGCTTCACAAACTTCTGCTGTAGACATAAAACCAAGTGGAAGAAATGAACTTCCCGAGGATCTGTTCACTGTAAAATATTCATCCTTCCCTGCTCCAATACCAGGCTGGCAAATGGGTGCACCACCTGGCACAGGTGTCTCAGTTCAATATAATAATATGGTGTCCATACCGAGCTTCCCACAACCATCAAAATCTACAAATCCATTTGATGTGGTCAATCAACCAACTCCCGTTCAAGCCCCAACATTTCCTTCTATGTCATCTTTGCAAGGTGCTCTGCCTAGTGTAATACCTTCAGCTACAGTGCACCCTTCAAACATGGCTAATCAATCTCTTGCCTGGAATCCTCCATCCTCATTATCATATGCACCAATGCCGCCTCCACAAGCACATACATTTGCCTCGGCATTGAGACCGAGGGCATACATGGAACAACAAATGGCCACTAACGTGACAATGCCAAGGTAA 1845 0.4444 MTSRVKDDEKNERIIRGLLKLTQNRRCINCNSLGPQYVCTNFWTFVCTSCSGIHREFTHRVKSVSMAKFTAQEVSALQEGGNQHAKEIFFKEWDPQTHSLPDSNNVDRLRDFIKHVYVDKRFTGEKSYDKPPRAQGDKDDSYENRRMETYQGGRKSPPYEDTYERRYSDRSSPGGRSPGYDKRSPGRPPIINDWRREDRFGDGKKFEDRKISDGGNKMESQSPERANDPGSSSPLPVVRPVREILGENVVPLRISEPPKANSGQAANGSGITQRTASSGSLASSNGTQTEVKLETIRSLIDFDDIPEPPIAPAIPQATPVTVAQLANPTSSAYQGLSNVNPLESMLSQLSVPSSLPAHVSGAQGPLAGSAPAAGNFTTFPASVASSTPSGLTTASPFNNAGPWHSLQYQQPQPLFTSTVGQSTIQQSTPPVNGAFNYQGHPSTLVPHAANVVNEEKYSVASQTSAVDIKPSGRNELPEDLFTVKYSSFPAPIPGWQMGAPPGTGVSVQYNNMVSIPSFPQPSKSTNPFDVVNQPTPVQAPTFPSMSSLQGALPSVIPSATVHPSNMANQSLAWNPPSSLSYAPMPPPQAHTFASALRPRAYMEQQMATNVTMPR* 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g0321 614 MobiDBLite consensus disorder prediction 124 150 - -
Psa7g0321 614 CDD ArfGap_AGFG 12 122 - -
Psa7g0321 614 Pfam Putative GTPase activating protein for Arf 13 124 IPR001164 GO:0005096
Psa7g0321 614 PANTHER ARF GTPASE ACTIVATOR 1 614 - -
Psa7g0321 614 PANTHER ARFGAP/RECO-RELATED 1 614 IPR044820 GO:0005096
Psa7g0321 614 MobiDBLite consensus disorder prediction 188 215 - -
Psa7g0321 614 PRINTS HIV Rev interacting protein signature 24 43 IPR001164 GO:0005096
Psa7g0321 614 PRINTS HIV Rev interacting protein signature 43 60 IPR001164 GO:0005096
Psa7g0321 614 PRINTS HIV Rev interacting protein signature 61 82 IPR001164 GO:0005096
Psa7g0321 614 ProSiteProfiles ARF GTPase-activating proteins domain profile. 12 130 IPR001164 GO:0005096
Psa7g0321 614 MobiDBLite consensus disorder prediction 260 289 - -
Psa7g0321 614 SMART arf_gap_3 12 130 IPR001164 GO:0005096
Psa7g0321 614 Gene3D Arf GTPase activating protein 2 131 IPR038508 -
Psa7g0321 614 MobiDBLite consensus disorder prediction 124 240 - -
Psa7g0321 614 MobiDBLite consensus disorder prediction 253 289 - -
Psa7g0321 614 SUPERFAMILY ArfGap/RecO-like zinc finger 11 123 IPR037278 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g0321 Psa-Chr7 22066844 22073536 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g0321 12 122 C2H2 Transcription Factor Family AT4G05330 35.897 4.34e-12 65.9