Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g0319 ATGAAGAAAACTCAAACACAAACACAAACCACACAAACCCTTCTTCTAGTTACAATCTTTCTATGTTTAACCTTAAACACACTCTCCCTCTCAACTCTCACAATTAATGACCAATCTCTTACCTTCGAAAATGACCGTCTCCGAAACGCTTACATTGCGTTACAAGCTTGGAAACAAGCCATTCTCTCTGATCCACAGAACTTCACTACCAACTGGGTTGGAGCCAATGTATGCAGCTACACCGGTATTTACTGTGCTCAAGCACCAGACAACCCTAAAATACGCACAGTCGCCGGTATTGATCTCAACGACGCCGACATTGCCGCTCATTTACCCGATGAGCTTGGACTCTTACAAGATCTCGCACTTTTTCATACAAACTCTAACAGATTATGTGGCACAGTTCCTCACACGTTTGAGAAACTGAAACTTCTGTTCGAATTGGATCTCAGTAACAACAGATTCGCCGGGAAGTTTCCGGAAGTTGTGTTCCGTCTTCCCGGCCTTAAATATTTGGATTTAAGGTTCAATGAGTTTGAAGGAACTGTTCCTAGAGAGTTATTTGATTTACCAATCGATGCCCTTTTCATAAATGATAACCGGTTTTCGTCTGTGCTTCCCGAGAATTTTGGTAACTCTCCGGCATCTGTTGTTGTTCTGGCGAACAATAAGTTCCATGGGTGCATTCCTTCGAGTATAGGAAACATGTCGAATTTGAATGAAATTAGTTTTATGAACAATTTGTTTAAGTCGTGTTTGCCGGATGAGATTGGGTTGTTGAAGAATCTAACTGTTTTTGATGTTAGTGTTAATCAGTTTGTGGGGACTTTGCCCGCGGCGATTGGAGGTGCGGTGAGTTTGGAGCAGCTTAATGTGGCGGATAATTTGTTATGTGGTAAGATCCCGGCGAGTATTTGTATGTTGCCTAATCTGAAGAACTTTACGTTTTCGAATAATTTCTTTACTGGTGAACCGCCGGCGTGTTTGAGTTTGCCGGCAACGGATGATAAGAGGAATTGTTTGCCGGCAAGGCCGTTTCAGAAGTCTCCGGGAGAATGTGTGGCGTATTTGTCTAAGAAGGTGGATTGTAAGTCGTTTAAGTGTAAGGCATTTGTTCCTTCTTTTCATTCGCCATCGTCTCCGGCTGTGTCGCCTACCTCTCCACCAGCTCCGCCGGGAGTGACACCTTCCTCCCCACCACTTCCGGGAACGGCACATTCTCCTCCAACGTCAAAAGTGTCACCGGTTTCTCCACCACTTCCGGGAAGTGCGCATTCCCCTCCACCGCCCACAGGAACACTACCTTCCTCCCCACCATCAACACACGCTTCTCCACCGGGACATTCACACTCTTCTCCACCAGGGCATTCACATTCTTCTCAGCCGGGGCATTCCCTACCTCCATCTACATCTCCAACTCCAGTGGGGTCGCCACCGTCACACACTTCAGTACCGTCGTCTCCGCCAGTAACTACACCACCAGCCTCTGCTCCTCATTATGACTCATCGCCGCCACAGGCTCATTCACCTCAACCGTCACCCCATCCTTCCCATTTCCTTTCACCACCACCGGGAATGACACCTTCCTCTCCACCAACGCCAGCAGTGGCACCTTCCTCTCCACCACCAGCACACTCTTCTCCACCGTCACAATGTTGGTTTGATTCTTGCTTAAGCTCGGAATGGTTGATTGATGTCAAGTTATTTATTAGGCAATATGATTCTTCGAGAAAGGAGGTTGAACCTGCAATGAATTTCAAGAGTGACGACGCCTCTAGTAACAGTGGATCCGATTCAGTGTCTTTGTCCTCGGGATTAGCAAGGTTGCTTATGGCAGTAACCACTTTAGAAAATACCGCCTTTTGCGACTAA 1872 0.4679 MKKTQTQTQTTQTLLLVTIFLCLTLNTLSLSTLTINDQSLTFENDRLRNAYIALQAWKQAILSDPQNFTTNWVGANVCSYTGIYCAQAPDNPKIRTVAGIDLNDADIAAHLPDELGLLQDLALFHTNSNRLCGTVPHTFEKLKLLFELDLSNNRFAGKFPEVVFRLPGLKYLDLRFNEFEGTVPRELFDLPIDALFINDNRFSSVLPENFGNSPASVVVLANNKFHGCIPSSIGNMSNLNEISFMNNLFKSCLPDEIGLLKNLTVFDVSVNQFVGTLPAAIGGAVSLEQLNVADNLLCGKIPASICMLPNLKNFTFSNNFFTGEPPACLSLPATDDKRNCLPARPFQKSPGECVAYLSKKVDCKSFKCKAFVPSFHSPSSPAVSPTSPPAPPGVTPSSPPLPGTAHSPPTSKVSPVSPPLPGSAHSPPPPTGTLPSSPPSTHASPPGHSHSSPPGHSHSSQPGHSLPPSTSPTPVGSPPSHTSVPSSPPVTTPPASAPHYDSSPPQAHSPQPSPHPSHFLSPPPGMTPSSPPTPAVAPSSPPPAHSSPPSQCWFDSCLSSEWLIDVKLFIRQYDSSRKEVEPAMNFKSDDASSNSGSDSVSLSSGLARLLMAVTTLENTAFCD* 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g0319 623 SUPERFAMILY L domain-like 51 332 - -
Psa7g0319 623 MobiDBLite consensus disorder prediction 382 442 - -
Psa7g0319 623 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 9 506 - -
Psa7g0319 623 MobiDBLite consensus disorder prediction 467 548 - -
Psa7g0319 623 PANTHER LRR EXTENSIN-LIKE PROTEIN 9 506 - -
Psa7g0319 623 PRINTS Proline rich extensin signature 384 400 - -
Psa7g0319 623 PRINTS Proline rich extensin signature 406 418 - -
Psa7g0319 623 PRINTS Proline rich extensin signature 418 439 - -
Psa7g0319 623 PRINTS Proline rich extensin signature 439 455 - -
Psa7g0319 623 PRINTS Proline rich extensin signature 468 493 - -
Psa7g0319 623 Pfam Leucine rich repeat 127 178 IPR001611 GO:0005515
Psa7g0319 623 MobiDBLite consensus disorder prediction 443 466 - -
Psa7g0319 623 MobiDBLite consensus disorder prediction 378 550 - -
Psa7g0319 623 Gene3D Ribonuclease Inhibitor 217 341 IPR032675 -
Psa7g0319 623 Gene3D Ribonuclease Inhibitor 50 216 IPR032675 -
Psa7g0319 623 Pfam Leucine rich repeat N-terminal domain 53 85 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g0319 Psa-Chr7 21995010 21999192 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g0319 37 368 Leucine-rich Repeat extension Gene Families AT3G24480 71.471 6.06e-173 499
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g0319 - - cam:101504763 582.022
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g0319 7 21995010 21999192 Psa7g0319 7 21995010 21999192 ECH