Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g0316 ATGTCTGATCTTAACTCCAGCAACAACACCTCCTTGTTCAAAATACCAACCATCAAGTATAACAAACTCTTCATCAATGGAGATTTTGTTGATTCTGTATCAGGAACAACATTTGAGACAATAGACCCAAGAACAGGAGAGGTGATTGCAAGAATCAGTGAAGGAGCTAAAGAAGACATTGACATTGCAGTTAAAGCAGCCCAGGAATCTCTCTGA 216 0.3935 MSDLNSSNNTSLFKIPTIKYNKLFINGDFVDSVSGTTFETIDPRTGEVIARISEGAKEDIDIAVKAAQESL* 72
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g0316 71 PANTHER CYTOSOLIC ALDEHYDE DEHYDROGENASE RF2C 5 70 - -
Psa7g0316 71 Pfam Aldehyde dehydrogenase family 29 69 IPR015590 GO:0016491
Psa7g0316 71 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 12 71 IPR016162 GO:0016491
Psa7g0316 71 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 5 70 - -
Psa7g0316 71 SUPERFAMILY ALDH-like 12 70 IPR016161 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g0316 Psa-Chr7 21696472 21698934 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g0316 7 71 Aldehyde Dehydrogenase Gene Family AT3G24503 60.000 3.23e-22 86.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g0316 K12355 - gmx:100811540 102.834