Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g0313 ATGAGTATTGACCATCCTAATGGCACAACATCCTCCATCACCAATGTCCCTACCATCAAGTTCACCAAACTATTCATCAATGGAGATTTTGTTGAATCAGTTTCAGGGAAGAGTTTTGAGACAATAGATCCAAGAACAGGAGATGTTATAGCAAGAATCAGTGAAGGAACCAAAGAAGACATTGATATTGCCGTAAAGGCAGCTCGTCGTGCATTTGACTCAGGTCCATGGCCTCGCCTCTCCGGCACTGAAAGGGCAAAAATAATGATGAAATTCGCGAACCTTATCGACGAAAACATAGAAGAGCTAGCAGCACTTGATGCCATTGATGCAGGAAAGTTGTACCATATGTGTAAGGCTTTAGACATTCCTTCTGCAGCAAATACACTACGTTACTATGCAGGTGCTGCTGATAAAATTCATGGAAATGTATTAAAACCTTCTCGACAGTTCCATGCTTATACATTGATGGAACCAATTGGTGTTGTTGGACACATCATTCCTTGGAACTTTCCTACTTCAATGTTCTTTGTCAAGGTTAGCCCTTGTTTGGCTGCTGGATGCACCATGGTTCTCAAACCTGCTGAACAAACACCTCTCTCCGCTTTGTTTTATGCTCATCTAGCTAAATTGGCTGGAATCCGGACGGAGTGTTGA 657 0.4247 MSIDHPNGTTSSITNVPTIKFTKLFINGDFVESVSGKSFETIDPRTGDVIARISEGTKEDIDIAVKAARRAFDSGPWPRLSGTERAKIMMKFANLIDENIEELAALDAIDAGKLYHMCKALDIPSAANTLRYYAGAADKIHGNVLKPSRQFHAYTLMEPIGVVGHIIPWNFPTSMFFVKVSPCLAAGCTMVLKPAEQTPLSALFYAHLAKLAGIRTEC* 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g0313 218 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 5 215 - -
Psa7g0313 218 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 5 218 IPR016162 GO:0016491
Psa7g0313 218 Pfam Aldehyde dehydrogenase family 30 214 IPR015590 GO:0016491
Psa7g0313 218 PANTHER NAD-DEPENDENT ALDEHYDE DEHYDROGENASE FAMILY PROTEIN 5 215 - -
Psa7g0313 218 SUPERFAMILY ALDH-like 16 214 IPR016161 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g0313 Psa-Chr7 21663268 21669978 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g0313 7 214 Aldehyde Dehydrogenase Gene Family AT3G24503 67.464 1.98e-98 293
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g0313 K12355 - gmx:100811540 351.673
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g0313 7 21663268 21669978 Psa1g0937 1 63671691 63674427 PCT