Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g0310 ATGGGTGTTCTTCCGTTGAACGGAAAAGTCAAAGACACCTTCGCGGTGGTGAAACGCTCTAGTGATCCGTACAGTGACTTTAGAACTTCCATGGTGGAGATGATCGTTGAGAAACAAATATTTTCACCAAGCGATTTGGAGAATCTTTTACAGTGCTTTCTGTCGCTTAACTCGTATCATCATCACAAGATCATTGTTGAAGTTTACACAGAGATTTGGGAAGCACTTTTCTCTGACTGGCTTTGA 246 0.4187 MGVLPLNGKVKDTFAVVKRSSDPYSDFRTSMVEMIVEKQIFSPSDLENLLQCFLSLNSYHHHKIIVEVYTEIWEALFSDWL* 82
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g0310 81 Pfam Transcriptional repressor, ovate 20 77 IPR006458 -
Psa7g0310 81 ProSiteProfiles OVATE domain profile. 16 75 IPR006458 -
Psa7g0310 81 PANTHER TRANSCRIPTION REPRESSOR OFP7 6 78 - -
Psa7g0310 81 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 14 77 IPR006458 -
Psa7g0310 81 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 6 78 IPR038933 GO:0045892
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g0310 Psa-Chr7 20879547 20880360 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Psa7g0310 Ovate 7.7e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g0310 - - cam:101496006 162.54