Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g0302 ATGGAGTTAGATCAGACCGAACCAACAACACCTAATTCCGATGATTTCTACCTCAATCTCTTAATCGAGTTATACAGCCTTCTAGTCAAAAGGAGTGATGGCGAATTCTATGCTGTTATACTCGAGCGATTGATGAGCAAATACAACCAACGTTCAATTTCTTTGGAAATGTTGATTGACGCCTTGAAGGAGAAGGAGGGCAAAATAGGTGTTGTTGTAGGTGTTGTAACGGATGATGATTTCATAGTACATGATGTCCCAGCAATGAAAGTTACAGCATTATGGTTCACAGAGACAGCACGTGCTGGTGGAGAATGTCTTACATTTGATCAATTCGTCTCCAGGGATCCCACTGGAAAGAACATGGTATGGGAGGTTATAAAGTTGATTATTATATATTGA 402 0.4005 MELDQTEPTTPNSDDFYLNLLIELYSLLVKRSDGEFYAVILERLMSKYNQRSISLEMLIDALKEKEGKIGVVVGVVTDDDFIVHDVPAMKVTALWFTETARAGGECLTFDQFVSRDPTGKNMVWEVIKLIIIY* 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g0302 133 Pfam Ribosomal protein 60S L18 and 50S L18e 6 123 IPR021131 -
Psa7g0302 133 PANTHER 60S RIBOSOMAL PROTEIN L18 5 123 IPR000039 GO:0003735|GO:0005840|GO:0006412
Psa7g0302 133 Gene3D - 2 128 - -
Psa7g0302 133 Coils Coil 45 65 - -
Psa7g0302 133 PANTHER 60S RIBOSOMAL PROTEIN L18-2-LIKE 5 123 - -
Psa7g0302 133 SUPERFAMILY Ribosomal proteins L15p and L18e 13 123 IPR036227 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g0302 Psa-Chr7 19852175 19853478 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g0302 5 118 Cytoplasmic Ribosomal Protein Gene Family AT2G47570 52.500 3.38e-33 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g0302 K02883 - dct:110101773 109.383