Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g0261 ATGGTTACCATGGACCAAGCTATTGACGCATACAAACTTGTGTCCACCATGGATTTGAATAATTTCAAAGACAATAGAGCCAATGCTTCCATTACCAATCATCAAACTTGTCTAAATGGTTTCATTGATTTCAACCTTCCTTCTCACTTAAACTACTTCCCTTCCATCTTAACCAACTTTACTAAATTGCTTAGCAATTCCTTGTCCATTACCAACACTCTAGCTTTTTCGTCCTCATCGTCATCCTCAAATCCGAAACAAAATGGGGGGAGAAGGTTGTTATCAGATGGATTTCCACATTGGCTTTCAGGTTCAGATAGAAAACTTCTACAGACGACACCAAGCGCTGATATTGTGGTGGCACAAGATGGAAGTGGGAACTATAAGACAATCTCTGAGGGTGTAGCTGCTGCTAAGGGAAGTGGAAAAGGAAGAGTTGTAATTCATGTGAAAGCAGGTGTTTATAAAGAGAATATTGATATAAAGAAGACAGTGAAGAATATAATGATATTTGGAGATGGAATGGATTCCACCATTGTTACCGCTAATCATAACGCAGAAGATGGTTCTACTACTTTCCGTTCGGCTACTTTTGCTGTTATGGGAGATGGTTTCATAGCAAAAGATATGACCTTCGAGAATACTGCCGGACCACAAAAACACCAGGCGGTGGCTCTCCGTTCCGGCGCCGATCACTCCGTTTTCTACCGATGTTCCTTCAAAGGCTATCAGGACACTCTATACGTTTATGCCAACCGTCAATTCTACCGTGACTGTAACATCTACGGAACAGTCGATTTCATCTTTGGTAACGCCGTTACAGTTCTTCAAAACTGCAACATCTTAGTTAGAAAACCTATGGGCAACCAACAGAACACCGTAACGGCACAGGGAAGAACAGATCCAAACGAGAATACCGGAATAGTGATCCATAACTGCCGTATCACCGCAGCAGGTGATTTGAAAGCATCTCAAAATTCAGTGAAAAGTTATCTAGGAAGGCCGTGGCAGAAGTATTCAAGAACGGTTGTAATGAAAAGTAATATTGACGGTGTTATAAATTCACAAGGTTGGGCTCCATGGAGTGGTGGTTTTGCCTTGAGCACACTTTATTATGCAGAATATATGAATGTTGGTGATGGTGCTAATACAGATGGGAGAGTGAATTGGTCTGGTTTTCATGTAATTACAAATCCTTCGGAAGCAGTTAAATTTTCTGTTGGTAATTTCTTGGCTGGTGAGTCATGGATTTCTGGTAGTGGTGTGCCGTTTGATGCAGGACTGTGA 1287 0.4149 MVTMDQAIDAYKLVSTMDLNNFKDNRANASITNHQTCLNGFIDFNLPSHLNYFPSILTNFTKLLSNSLSITNTLAFSSSSSSSNPKQNGGRRLLSDGFPHWLSGSDRKLLQTTPSADIVVAQDGSGNYKTISEGVAAAKGSGKGRVVIHVKAGVYKENIDIKKTVKNIMIFGDGMDSTIVTANHNAEDGSTTFRSATFAVMGDGFIAKDMTFENTAGPQKHQAVALRSGADHSVFYRCSFKGYQDTLYVYANRQFYRDCNIYGTVDFIFGNAVTVLQNCNILVRKPMGNQQNTVTAQGRTDPNENTGIVIHNCRITAAGDLKASQNSVKSYLGRPWQKYSRTVVMKSNIDGVINSQGWAPWSGGFALSTLYYAEYMNVGDGANTDGRVNWSGFHVITNPSEAVKFSVGNFLAGESWISGSGVPFDAGL* 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g0261 428 PANTHER PECTINESTERASE INHIBITOR 5-RELATED 24 427 - -
Psa7g0261 428 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 10 74 IPR035513 -
Psa7g0261 428 PANTHER PECTINESTERASE 24 427 - -
Psa7g0261 428 Pfam Pectinesterase 117 413 IPR000070 GO:0030599|GO:0042545
Psa7g0261 428 Gene3D - 111 428 IPR012334 -
Psa7g0261 428 SUPERFAMILY Pectin lyase-like 112 427 IPR011050 -
Psa7g0261 428 ProSitePatterns Pectinesterase signature 2. 261 270 IPR033131 -
Psa7g0261 428 ProSitePatterns Pectinesterase signature 1. 142 161 IPR018040 -
Psa7g0261 428 Gene3D Invertase/pectin methylesterase inhibitor family protein 2 75 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g0261 Psa-Chr7 17580242 17582115 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g0261 28 428 Carbohydrate Esterase AT1G23200 55.529 3.31e-156 451
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g0261 - - gmx:100775898 671.389