Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g0247 ATGAGTAAGCGTGAGATGTCGAAGGTGAAGCAGTCGCCGGTTCCTTTGGCTACCTTGATTGGCCGTGAGCTTCGGAATGGGAAAGTTGAAAATCCTTTTGTGAAGTATGGACAAGCTGGATTGGCTAAGAAAGGAGAGGATTACTTTCTGATTAAAACAGATTGCCACAGGGTTCCCGGGGATCCATCGACTGCGTTTTCTGTCTTTGCGGTTTTTGATGGGCATAACGGTATATCAGCTGCTATTTATGCAAAAGAGAACTTGCTTAATAATGTTGTGAGTGCAATACCGCAAGATATCAGCAGGGATGCATGGCTACAGGCCCTGCCTCGCGCTCTAGTTGTTGGTTTTGTGAAGACTGACACAGAGTTTCAGAAGAAGGGGGAAACCTCTGGAACAACAGTTACATTTGTTCTTGTTGATGGGTGGACTGTCACTGTTGCATCTGTTGGTGATTCCCGTTGCATATTAGATACTCAGGGAGGTGTAGTTTCTCTCCTGACAGTTGATCACAGACTTGAAGAGAATGTAGAAGAGAGGGAACGTGTTACTGCCAGTGGTGGCGAAGTAGGAAGACTCAATGTATTTGGGGGAAATGCGGTAGGACCTCTTCGCTGCTGGCCTGGTGGACTTTGCCTATCTAGATCAATAGGTGACACAGATGTGGGAGAGTATATTGTGCCAATACCACATGTTAAACAAGTGAAACTTTCAAATGCTGGTGGAAGACTTATTATAGCCTCTGATGGTATTTGGGATACTATATCGAATGATACAGCCGCCATGTCATGCCGGGGTCTACCTGCAGAACTTGCTGCTAAGCTAGTAGTTAAGGAAGCTCTAAGATCTAGAGGCTTGAAGGATGATACAACCTGCCTTGTAGTAGATATTATTCCTTCTGACCACCCTGTATTACCACCAACTCCAAGAAAGAAACATAATATGCTAACATCGCTTTTCTTTGGAAAGAAATCTGAGAACTCTACAAACAAAGCTACGAGCAAGCTTTCTGCAGTTGGTGTTGTGGAGGAGTTATTTGAAGAGGGTTCTGCAATGCTTATAGAAAGGCTTGGTAAGGACTTTCCATTTAATAAGAATTCGGAGATTTTCCGATGTGCAATTTGTCAAGTGGATCAACCCCCTGGGAATGGTCTATCAGTGAACTCTGGACCTTTCTTTTCTCCAGCATCTAAGCCATGGGAAGGCCCATTTCTCTGCACAAACTGTCGAAAGAAAAAAGATGCCATGGAAGGAAAGAGGCCCAGCACACATGCTGTTACAGCACAGTAA 1290 0.445 MSKREMSKVKQSPVPLATLIGRELRNGKVENPFVKYGQAGLAKKGEDYFLIKTDCHRVPGDPSTAFSVFAVFDGHNGISAAIYAKENLLNNVVSAIPQDISRDAWLQALPRALVVGFVKTDTEFQKKGETSGTTVTFVLVDGWTVTVASVGDSRCILDTQGGVVSLLTVDHRLEENVEERERVTASGGEVGRLNVFGGNAVGPLRCWPGGLCLSRSIGDTDVGEYIVPIPHVKQVKLSNAGGRLIIASDGIWDTISNDTAAMSCRGLPAELAAKLVVKEALRSRGLKDDTTCLVVDIIPSDHPVLPPTPRKKHNMLTSLFFGKKSENSTNKATSKLSAVGVVEELFEEGSAMLIERLGKDFPFNKNSEIFRCAICQVDQPPGNGLSVNSGPFFSPASKPWEGPFLCTNCRKKKDAMEGKRPSTHAVTAQ* 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g0247 429 ProSiteProfiles PPM-type phosphatase domain profile. 25 297 IPR001932 -
Psa7g0247 429 PANTHER ALPHABET, ISOFORM E-RELATED 2 427 - -
Psa7g0247 429 Pfam Protein phosphatase 2C 62 266 IPR001932 -
Psa7g0247 429 SMART PP2C_4 23 295 IPR001932 -
Psa7g0247 429 CDD PP2Cc 43 297 IPR001932 -
Psa7g0247 429 PANTHER PROTEIN PHOSPHATASE 2C 5-RELATED 2 427 - -
Psa7g0247 429 SUPERFAMILY PP2C-like 38 297 IPR036457 -
Psa7g0247 429 SMART PP2C_SIG_2 50 297 IPR001932 -
Psa7g0247 429 Gene3D - 34 301 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g0247 Psa-Chr7 16549773 16553571 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g0247 1 427 PP2C-type Phosphatase Gene Family AT1G09160 76.347 0.0 661
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g0247 - - gmx:100807886 759.985