Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g0237 ATGGATAAACTCATATTCAATTTTTGCATTGCATACTTTCTCTTTTTTTCTCTCTTGTTTGTTCATGCCAAATTATCATGCAATCAAACACCATACCCTCATGTTTGCAACCATTACATTGGAACCACTAATACACTATCAACCATTGATTCTTATTCATTCCATGATATTTCCCTTAAGGTTACCATGGACCAAGCTATTGACGCATACAAACTTGTGTCCACCATGGACTTGAATAATTTCAAAGACAATAGAGCCAAGTCAGCATGGGAAGATTGTGTAGAGCTTTATGAGGATACAATTTATCAACTTAATCGCTCCATAAACTCAAACAATTTTAATGACAAATTAACTTGGCAAAGTGCTTCCATTACCAATCATCAAACTTGTCTAAATGGTTTCATTGATTTCAATCTTCCTTCTCACATAAACTACTTCCCTTCCATCTTAACCAACTTTACTAAATTGCTTAGCAATTCATTGTTCATTACCAACACTCTAGCTTCTTTGACGCCGTCTTCATTATCATCCTCCTCGTTGTCAAGCACAAAACAAAATGGTGGGAGAAGGTTGTTATCAGATGGATTTCCACATTGGCTTTCAGGTTCAGATAGAAAGCTTCTACAGACAACATCAAGCGCTGATATTGTGGTGGCACAAGATGGAAGTGGGAACTATAAGACAATCTCAGAAGGTGTAGCAGCTGCTAAGGGAAGTGGAAAAGGAAGAGTTGTGATTCATGTGAAAGCAGGTGTATATAAAGAGAACATTGATATAAAGAAGACAGTGAAGAATATAATGATATTTGGAGATGGAATGGATTCCGCACCATTGTTATGGTAA 843 0.3654 MDKLIFNFCIAYFLFFSLLFVHAKLSCNQTPYPHVCNHYIGTTNTLSTIDSYSFHDISLKVTMDQAIDAYKLVSTMDLNNFKDNRAKSAWEDCVELYEDTIYQLNRSINSNNFNDKLTWQSASITNHQTCLNGFIDFNLPSHINYFPSILTNFTKLLSNSLFITNTLASLTPSSLSSSSLSSTKQNGGRRLLSDGFPHWLSGSDRKLLQTTSSADIVVAQDGSGNYKTISEGVAAAKGSGKGRVVIHVKAGVYKENIDIKKTVKNIMIFGDGMDSAPLLW* 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g0237 280 PANTHER PECTINESTERASE INHIBITOR 5-RELATED 18 275 - -
Psa7g0237 280 Gene3D - 174 280 IPR012334 -
Psa7g0237 280 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 26 167 IPR035513 -
Psa7g0237 280 ProSitePatterns Pectinesterase signature 1. 240 259 IPR018040 -
Psa7g0237 280 SUPERFAMILY Pectin lyase-like 210 275 IPR011050 -
Psa7g0237 280 Gene3D Invertase/pectin methylesterase inhibitor family protein 24 169 IPR035513 -
Psa7g0237 280 SMART PMEI_2 16 163 IPR006501 GO:0004857
Psa7g0237 280 TIGRFAM PME_inhib: pectinesterase inhibitor domain 8 167 IPR006501 GO:0004857
Psa7g0237 280 PANTHER PECTINESTERASE 18 275 - -
Psa7g0237 280 Pfam Plant invertase/pectin methylesterase inhibitor 26 161 IPR006501 GO:0004857
Psa7g0237 280 Pfam Pectinesterase 215 275 IPR000070 GO:0030599|GO:0042545
Psa7g0237 280 CDD PMEI-like_3 25 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g0237 Psa-Chr7 15883551 15884393 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g0237 10 275 Carbohydrate Esterase AT1G23200 44.710 6.12e-60 197
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g0237 - - gmx:100817350 405.216