Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g0236 ATGTTCCTTCAAAAGGCTATCAGGAACACTCTATACGTCTATGCCAACCGTCAATTCTACCGTGACTGTAACATCTACGGAACAGTCGATTTCATCTTTGGCAACGCCGTTACAGTTCTTCAAAACTGCAACATCTTAGTTAGAAAACCTATGGGCAACCAACAGAACACCGTAACGGCACAGGCAAGAACAGATCCAAACGAGAACACCGGAATAGTGATCCATAACTGCCGTATCACCGCAGCAGGTGATTTGAAAGCATCTCAAAATTCAGTGAAAAGTTATCTAGGAAGACCGTGGCAGAAGTATTCAAGAACGGTTGTAATGAAAAGTAACATTGATGGTGTTATAAACTCTCAAGGTTGGGCTCCATGGAGTGGTGGTTTTGCCTTGAGCACACTTTATTATGCAGAATATATGAATGTTGGTGATGGTGCTAATACAGATGGGAGAGTGAATTGGTCTGGTTTTCATGTAATTACAAATCCTTCGGAAGCAGTTAAATTTTCGGTTGGTAATTTCTTGGCTGGTGAGTCATGGATTTCTGGAAGTGGTGTGCCCTTTGATTCAGGCTTGTGA 579 0.4214 MFLQKAIRNTLYVYANRQFYRDCNIYGTVDFIFGNAVTVLQNCNILVRKPMGNQQNTVTAQARTDPNENTGIVIHNCRITAAGDLKASQNSVKSYLGRPWQKYSRTVVMKSNIDGVINSQGWAPWSGGFALSTLYYAEYMNVGDGANTDGRVNWSGFHVITNPSEAVKFSVGNFLAGESWISGSGVPFDSGL* 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g0236 192 Pfam Pectinesterase 6 177 IPR000070 GO:0030599|GO:0042545
Psa7g0236 192 ProSitePatterns Pectinesterase signature 2. 25 34 IPR033131 -
Psa7g0236 192 SUPERFAMILY Pectin lyase-like 9 191 IPR011050 -
Psa7g0236 192 PANTHER PECTINESTERASE 5 191 - -
Psa7g0236 192 PANTHER PECTINESTERASE INHIBITOR 5-RELATED 5 191 - -
Psa7g0236 192 Gene3D - 5 192 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g0236 Psa-Chr7 15882449 15883027 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g0236 5 192 Carbohydrate Esterase AT2G45220 62.234 1.05e-83 254
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g0236 - - mtr:MTR_8g104645 355.91