Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g0225 ATGCTCCAGGGTCGAAGAAAATCACAAGAGGATCGCACTCTCTGTGTATCGATGTTGCGAATTCCATTCCCCGGTAAACTATTCACTATTCCAATTTCCTTTTCTGTTTCGTGTTCCAGAGGCTTCTTCGGAGATTTATTTCTGATTCTATGTGGTTTGTTGGCTGGATGCAGTACAGGGATCAGGGAGTCTCCTAAGGAAGCTAAAGCCTCCTTATTAGAGCTATATAGGCAGACAGAGCGTGATGTGAAGGAATTGACTAGGAATCACCATCCAGACAGAGAGGATGAAAGAACTCGGGTGGAAGCTGCTGGTGGTCAAGTTCTAAATTGGGGTGGTTTGCCTCGCGTAAATGGTCAGCTGGCCATACACGAGCTATTGGTGATGTGTTATTTAAAAGCGTACGATTTTAATTCAATATGGATTCTCCTAATTGGCCGTCTTTGCTGTGGATTTGGTTCTGCCAGAGCCGTAAACCGGCGCTACATCAGTGATTGTGTGCCTTTGAAAATCCGCATACAAGCATCGGCAGAAGACAGTGATGCACTTGAAAAGGGGCTACAGCAACCATTGCTGATTACTTCGGAAGATAAGGTAGATGAAGATGCTGATCAGGATAATGATGATAGCGAGGAAGCTCCAGAGGAATCTCGTCAGCCAGCCACTTCAATTGGATCGGCATATAGACTCCTTACACCTTCTGTAAAGGCAAATTCTGTGGCATCAGAAATCATGGTTTTAATTGGCATAGTCTCGGCCTTTCATGTAATCATTCCATACTCTGAGCTGCAGTACATCTGTTCAGGTCTTCTCATGTTTGTTTCTGCTGAAGTACTTGAAGGGCATCAACAAGATAACGGATGGGCATGTGGATATTATGTCATGAAAAATATGTTTGACATTATTGATGCTTGTATTGTTGAAAGATTCAATGAGATATTCACAGACACCTCATCATATGAAAAGAGTCAATTGATCACATCCGACAACTTTGGGCTCAATTCTTTTTGCAAAAGGTTGAAGAGCAAGAGAACCAGGAAAGAAAGATTTAATGACAAACAGAACGATTAA 1071 0.4248 MLQGRRKSQEDRTLCVSMLRIPFPGKLFTIPISFSVSCSRGFFGDLFLILCGLLAGCSTGIRESPKEAKASLLELYRQTERDVKELTRNHHPDREDERTRVEAAGGQVLNWGGLPRVNGQLAIHELLVMCYLKAYDFNSIWILLIGRLCCGFGSARAVNRRYISDCVPLKIRIQASAEDSDALEKGLQQPLLITSEDKVDEDADQDNDDSEEAPEESRQPATSIGSAYRLLTPSVKANSVASEIMVLIGIVSAFHVIIPYSELQYICSGLLMFVSAEVLEGHQQDNGWACGYYVMKNMFDIIDACIVERFNEIFTDTSSYEKSQLITSDNFGLNSFCKRLKSKRTRKERFNDKQND* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g0225 356 Coils Coil 69 89 - -
Psa7g0225 356 Pfam Protein phosphatase 2C 82 122 IPR001932 -
Psa7g0225 356 PANTHER SPX DOMAIN, MAJOR FACILITATOR SUPERFAMILY-RELATED 177 237 - -
Psa7g0225 356 PANTHER SPX DOMAIN, MAJOR FACILITATOR SUPERFAMILY-RELATED 129 177 - -
Psa7g0225 356 PANTHER SPX DOMAIN, MAJOR FACILITATOR SUPERFAMILY-RELATED 240 281 - -
Psa7g0225 356 SUPERFAMILY PP2C-like 79 133 IPR036457 -
Psa7g0225 356 Gene3D - 67 210 IPR036457 -
Psa7g0225 356 MobiDBLite consensus disorder prediction 199 213 - -
Psa7g0225 356 MobiDBLite consensus disorder prediction 197 222 - -
Psa7g0225 356 PANTHER INNER MEMBRANE TRANSPORT PROTEIN YAJR 240 281 - -
Psa7g0225 356 PANTHER INNER MEMBRANE TRANSPORT PROTEIN YAJR 129 177 - -
Psa7g0225 356 PANTHER INNER MEMBRANE TRANSPORT PROTEIN YAJR 177 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g0225 Psa-Chr7 15494378 15498944 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g0225 63 123 PP2C-type Phosphatase Gene Family AT3G63320 47.619 2.11e-18 83.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g0225 - - tcc:18613280 91.2781