Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g0177 ATGCTCAGTAGAAGAAAGTTCCTCACCATTTTTTCATCTTCCAATGTTTCTCAACTAATTTCTCACCAATTACAATCAAATGCACTTCCACATCCAATACACAACCCTTTCCCCCAAATTTCAAACAATTTTAGGGTTTTACTATTCCATCTCTATGGAACCCAAGATTCCAAATTTCCCGAATACCAAATGCCTACAGTTACATGGGGAGTGATTCAAGGCCGAAAAGAGAAACTCGTTTCGCGTGTCATCATTTTCGATTACCTCAAGGGTTTGGGAATTATTCCCGATGAGTTGCAGGATTTGGAGCTTCCTTCAACTGTTGATGTCATGAGGGAACGCGTTGAGTTTCTTCAGAAATTGGGTTTAACGATTGATGATATAAATCAGTATCCTTTGATGTTGGGTTGCAGTGTGAGAAAAAATGTGATTCCTGTTTTAGGGTATTTGGAAAAAATTGGGATTTCTAGGTCTAAACTTGGTGAATTTGTTAAGAGTTATCCACAAGTTTTGCATGCTAGTGTTATTGTTGAGCTTGCTCCTGTTATTAAGTTCCTTAGAGGGCTTGATGTGGAGAAAGATGATATTGGGTTTGTGTTGCAAAAGTATCCTGAACTTTTAGGGTTTAAGCTTGAAGGGACTATGAGTACTTCAGTGGCTTATCTTGTTAGTATTGGTGTTAATCCTAGGGATATTGGTCCAATGGTTACACAGTATCCTTATCTTTTAGGGATGAGAGTTGGTACTATGATAAAGCCTCTTGTTGATTATTTGGTTAGTTTAGGGTTGCCGAAGAAGATTCTAGCTAGGATGTTGGAGAAAAGAGCTTATATACTTGGCTATGATCTTGAAGAGACTGTGAAACCTAATGTTGATTGTTTGATCAGTTTTGGTGTGAGGAAGGAGTGTTTGCCTTCGATTATCGCGCAATATCCGCAGATTATTGGGCTGCCTCTTAAGGCTAAATTGTCTTCGCAGCAATATTTTTTTAGTTTGAAGCTTAAGGTTGATCCGGAAGGGTTTGCGAGGGTGGTGGAGAAGCTGCCGCAGGTGGTTAGTCTTCACCAAAATGTGATTATGAAGCCGGTTGAGTTTTTACTCGGTAGGGCAATACCGTCGCAAGACGTGTCTAGTATGGTGGTCAAGTGTCCTCAGTTGGTTGCGTTGCGAGTTGAGCTCATGAAGAATAGTTATTTCTTCTTCAAAAGTGAGATGGGGAGACCAGGAAAAGAGCTCGTGGAGTTCCCTGAATACTTTACTTATAGTCTGGAGTCAAGGATTAAACCTAGATACCAGAGACTTAAGAGCAAGGGGATAAATTGTTCATTGAATTGGATGCTGAATTGTAGTGACCAGAGATTCGAAGAGAGATTGCAGGGAAATTATATCGAAACCGAAAGTATAGGTCCTTCGTTCTTAATTGGTGGAAAATTAGAGTTACCAGGGAATGACATAGTTTCAGATGAGGAAGAGGAGAGTGATGATGAAATGCTATACAGAAGAACTGTTTCTCTTTAG 1518 0.3986 MLSRRKFLTIFSSSNVSQLISHQLQSNALPHPIHNPFPQISNNFRVLLFHLYGTQDSKFPEYQMPTVTWGVIQGRKEKLVSRVIIFDYLKGLGIIPDELQDLELPSTVDVMRERVEFLQKLGLTIDDINQYPLMLGCSVRKNVIPVLGYLEKIGISRSKLGEFVKSYPQVLHASVIVELAPVIKFLRGLDVEKDDIGFVLQKYPELLGFKLEGTMSTSVAYLVSIGVNPRDIGPMVTQYPYLLGMRVGTMIKPLVDYLVSLGLPKKILARMLEKRAYILGYDLEETVKPNVDCLISFGVRKECLPSIIAQYPQIIGLPLKAKLSSQQYFFSLKLKVDPEGFARVVEKLPQVVSLHQNVIMKPVEFLLGRAIPSQDVSSMVVKCPQLVALRVELMKNSYFFFKSEMGRPGKELVEFPEYFTYSLESRIKPRYQRLKSKGINCSLNWMLNCSDQRFEERLQGNYIETESIGPSFLIGGKLELPGNDIVSDEEEESDDEMLYRRTVSL* 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g0177 505 PANTHER CGI-12 PROTEIN-RELATED 46 488 IPR003690 GO:0003690|GO:0006355
Psa7g0177 505 Gene3D Transcription termination factor 3, mitochondrial 112 251 IPR038538 -
Psa7g0177 505 Gene3D Transcription termination factor 3, mitochondrial 252 465 IPR038538 -
Psa7g0177 505 PANTHER EXPRESSED PROTEIN 46 488 - -
Psa7g0177 505 SMART mt_12 233 264 IPR003690 GO:0003690|GO:0006355
Psa7g0177 505 SMART mt_12 305 337 IPR003690 GO:0003690|GO:0006355
Psa7g0177 505 SMART mt_12 269 300 IPR003690 GO:0003690|GO:0006355
Psa7g0177 505 SMART mt_12 197 228 IPR003690 GO:0003690|GO:0006355
Psa7g0177 505 SMART mt_12 342 372 IPR003690 GO:0003690|GO:0006355
Psa7g0177 505 SMART mt_12 125 156 IPR003690 GO:0003690|GO:0006355
Psa7g0177 505 SMART mt_12 161 192 IPR003690 GO:0003690|GO:0006355
Psa7g0177 505 SMART mt_12 409 440 IPR003690 GO:0003690|GO:0006355
Psa7g0177 505 SMART mt_12 377 408 IPR003690 GO:0003690|GO:0006355
Psa7g0177 505 Pfam mTERF 147 455 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g0177 Psa-Chr7 12786418 12788460 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Psa7g0177 mTERF 4.5e-107 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g0177 K15032 - gmx:100809590 832.017