LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Psa7g0167	ATGGTTTCAAGATCTTATTCAAATCTACTAGAGCTTGCTTCTGGTGAGTCTCCAACTTTTGAACAGATTAATAGGAGGATTCCTAGGATTATGACTGTTGCTGGTTTGATATCTGATGTTGATGATGATGACCCTTTGGAGAGTGTGTGTTCTGATCCTTCTTCTTCATCTGTTCAAAGAGAAAGGATCATAATTGTGGCTAATCAGTTACCTATAAAGGCTCAGAGGAAGCAAGATGGTGGTAATAGTAACAGGAGTAATTGGTTTTTCAGTTGGGATGAGAATTCACTTCTGCTTCAACTCAAAGATGGGTTAGGAGATGATGATATTGAGGTTATTTATGTTGGTTGTCTTAAGGAAGATGTTCATCTGAATGAACAAGATGAGGTTTCACAGATACTTCTTGAGAGCTTTAAATGTGTTCCAGTTTTTCTCCCTGGTGATATGTTTACAAGATACTATCATGGCTTTTGCAAGCAACAGTTATGGCCACTGTTTCATTACATGTTGCCTTTGTCACCAGACCTTGGTGGTAGGTTCAATAGGTCACTGTGGCAGGCTTATGTATCAGTCAACAAGATATTTGCTGATAGGATTATGGAAGTGATTAACCCTGAAGATGATTATGTTTGGATTCATGATTATCATCTCATGGTTTTGCCAACTTTCTTGAGGAAAAGGTTTAATAGAGTGAAACTTGGATTTTTTCTACATAGTCCTTTTCCTTCCTCAGAAATTTACAAGACATTGCCTATTAGGGAAGAGCTTTTGAGAGCCCTTTTGAATTCTGATTTGATTGGTTTCCATACTTTTGATTATGCAAGACATTTTCTCTCATGTTGTAGTAGGTTGCTTGGTCTTACCTATGAATCTAAAAGGGGTAATATTGGGATTGAATATTATGGTAGGACAGTTAGTATCAAGATTCTTCCTGTTGGCATACACATGGGCCAGCTTCAATCAGTTCTGAGCTTATCAAAGACTGAAGAGAAAGTTTCTGAGCTCATAAGACAGTTTTCTGATAATGGAAAGATAATGTTACTTGGTGTGGATGACATGGATATCTTCAAAGGGATAAGTTTGAAGCTATTAGCCATGGAGCAGCTTCTTATTCAGCATCCTGAGTGGCATGGAAAGGTTGTGTTAGTTCAGATAGCCAATCCTGCAAGAGGGAAAGGGAGGGATGTGAAGGAAGTTCAAGAAGACACTAAGGCGACAGCGAAGCGGATTAATGAAGCATTTGGTAAACCTGGTTATGATCCTGTCATTCTGATTGAGGAACCGTTAAGGTTTTATGAAAAAGTTGCATATTATGTTGTGGCCGAGTGTTGTTTAGTGACTGCGGTTAGGGATGGAATGAATCTGATACCGTATGAGTATATAATCAGTCGTCAAGGAACTGAAAAATTGGATAAAGTTTTGGGAATAGGTTCGTCTCTTAAGAAAAGCATGCTGGTTGTGTCTGAGTTTATTGGTTGTTCGCCGTCTTTAAGTGGAGCTATTAGAGTGAATCCATGGAATATTGATGCGGTAGCAGATGCGATGGACTTGGCTTTGGAAATGGCTGATTCAGAGAAACAGCTTAGGCACGAGAAGCATTATCGATATGTTAGTACTCATGATGTCGGTTATTGGGCTCGTAGCTTCTTGCAAGATTTGGAAAGGACTTGTAGTGATCATGTGAGGAGAAGGTGGTGGGGGATTGGTTTTGGATTGAGTTTTAGAGTTGTAGCACTTGATCCAAACTTCAAGAAGCTATCAATGGAGCACATAGTTTCGGCTTACAAGCGGACAAAAACTAGGGCGATCCTTCTAGATTATGATGGTACACTAATGCCTCAGGCTTCCATTGATAAGAGCCCAACCAGTAATTCCATTAAAATGCTTAATAGTTTGTGTAATGATGAGAACAACATGGTGTTTCTCGTCAGTGCTAAAGGCCGAACAAAGCTTGCTGAGTGGTTTTCTGCTTGTGAAAATCTGGGAATTGCTGCTGAACATGGTTACTTTTTAAGACTTAGGCGGGATGCAGAATGGGAAACCTGCGGACCTGTAACAGACTCCAGTTGGAAACAAATTGCCGAGCCTGTGATGAAGCTTTATACCGAAACAACCGATGGATCCACAATTGAAGATAAAGAGACCGCACTTGTTTGGTGCTACGAGGATGCAGATCCAGATTTTGGATCGTGCCAGGCTAAAGAACTTCTTAATCATCTTGAAAGTGTGCTTGCAAATGAACCAGTAACAGTGAAGAGTAGCCTGAATAATATAGAGGTTAAACCACAGGGTGTGAACAAGGGACTTGTGGCTAAACGCCTACTTTCGACCATGCAAGAAAAGGGAATGTCACCTGATTTTGTCTTGTGTATCGGAGACGACCGGTCTGATGAAGACATGTTTGAGGTAATCACTAGCTCCGGTTCTTCCATGGCACCCAGGGCTGAAGTATTTGCATGCACTGTTGGTAGAAAACCCAGTAAGGCAAAGTACTATCTGGATGATACTACTGATATAGTGAGAATGGTGCAGGGTTTAGCCTCTGTTTCAGACCAAACAGGTCTATTCTAG	2571	0.4061	MVSRSYSNLLELASGESPTFEQINRRIPRIMTVAGLISDVDDDDPLESVCSDPSSSSVQRERIIIVANQLPIKAQRKQDGGNSNRSNWFFSWDENSLLLQLKDGLGDDDIEVIYVGCLKEDVHLNEQDEVSQILLESFKCVPVFLPGDMFTRYYHGFCKQQLWPLFHYMLPLSPDLGGRFNRSLWQAYVSVNKIFADRIMEVINPEDDYVWIHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYKTLPIREELLRALLNSDLIGFHTFDYARHFLSCCSRLLGLTYESKRGNIGIEYYGRTVSIKILPVGIHMGQLQSVLSLSKTEEKVSELIRQFSDNGKIMLLGVDDMDIFKGISLKLLAMEQLLIQHPEWHGKVVLVQIANPARGKGRDVKEVQEDTKATAKRINEAFGKPGYDPVILIEEPLRFYEKVAYYVVAECCLVTAVRDGMNLIPYEYIISRQGTEKLDKVLGIGSSLKKSMLVVSEFIGCSPSLSGAIRVNPWNIDAVADAMDLALEMADSEKQLRHEKHYRYVSTHDVGYWARSFLQDLERTCSDHVRRRWWGIGFGLSFRVVALDPNFKKLSMEHIVSAYKRTKTRAILLDYDGTLMPQASIDKSPTSNSIKMLNSLCNDENNMVFLVSAKGRTKLAEWFSACENLGIAAEHGYFLRLRRDAEWETCGPVTDSSWKQIAEPVMKLYTETTDGSTIEDKETALVWCYEDADPDFGSCQAKELLNHLESVLANEPVTVKSSLNNIEVKPQGVNKGLVAKRLLSTMQEKGMSPDFVLCIGDDRSDEDMFEVITSSGSSMAPRAEVFACTVGRKPSKAKYYLDDTTDIVRMVQGLASVSDQTGLF*	857

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Psa7g0167	856	Pfam	Glycosyltransferase family 20	62	554	IPR001830	GO:0003824\|GO:0005992
	Psa7g0167	856	Pfam	Trehalose-phosphatase	604	836	IPR003337	GO:0003824\|GO:0005992
	Psa7g0167	856	SUPERFAMILY	HAD-like	601	846	IPR036412	-
	Psa7g0167	856	TIGRFAM	T6PP: trehalose-phosphatase	599	846	IPR003337	GO:0003824\|GO:0005992
	Psa7g0167	856	SUPERFAMILY	UDP-Glycosyltransferase/glycogen phosphorylase	62	557	-	-
	Psa7g0167	856	Gene3D	Glycogen Phosphorylase B;	322	538	-	-
	Psa7g0167	856	PANTHER	ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE [UDP-FORMING] 6	1	853	-	-
	Psa7g0167	856	CDD	HAD_TPP	602	841	-	-
	Psa7g0167	856	Gene3D	Glycogen Phosphorylase B;	54	321	-	-
	Psa7g0167	856	PANTHER	TREHALOSE-6-PHOSPHATE SYNTHASE	1	853	IPR001830	GO:0003824\|GO:0005992
	Psa7g0167	856	CDD	GT20_TPS	62	554	IPR001830	GO:0003824\|GO:0005992
	Psa7g0167	856	Gene3D	-	600	728	IPR023214	-
	Psa7g0167	856	Gene3D	-	730	854	IPR023214	-
	Psa7g0167	856	TIGRFAM	HAD-SF-IIB: HAD hydrolase, family IIB	603	805	IPR006379	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Psa7g0167	Psa-Chr7	12096799	12099938	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Psa7g0167	1	852	Trehalose Biosynthesis Gene Families	AT1G68020	79.745	0.0	1434

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Psa7g0167	K16055		-	cit:102609352	1482.23