Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g0153 ATGATGTGTTCTTTTAAGCTTACAATGTTTCTGTTCTTTTTCCTTGTCATTGTTCATACTCATTCTAGAGTTCTTGTGGAGGAACATATTGATATTGGCCTTGTGAATGATAAAAACTCACTTGTTTCATTCATGTCATGCATTATTTTCGACCCCGAAAACGCGCTAACGAGTTGGAAATCGAATGTTGATCATGTTTGCGATTGGTCTGGTGTAAAATGCAACAATGCGAGTAACAACAGAAGGATCATAGAGCTTGATCTAAGTGGAAGATCATTAACAGGAACTATATCCCCTTCTCTTGCTAACCTCTCTTCATTGCAAATTCTCGACCTTTCTCGAAATCATTTGACGGGTCACATTCCAAGAGAATTAGGCTATTTAGTTCATCTTCAAGAACTTAGTCTATCTTGGAATTTTCTTCAAGGGAACATTCCTTTAGAATTTGGTTCATTGCACAACATGTATTACCTTGACTTGGGAAGCAATCAACTTGAGGGAGAGATTCCTCCATCACTTTTATGTAATGGAACTTCATTGAGTTATATAGATCTCTCTAATAATTCATTAGTGGGAGAGATTCCATTAAACAATAATAAGTGTGTGCTTAAAGAGCTTAAGTTTCTATTACTTTGGTCTAACAAACTTGTAGGACAAGTTCCTTTGGCTCTTTCAAACTCTACCAAGCTTAAATGGCTTGATTTGGAGTCAAACATGTTGAGTGGTGAACTTCCATCTAAGATTATATGTAATTTTCCACATTTGCAATTCCTCTACTTATCATATAACAATTTTGTTAGCCATGATGGTAACACTAACCTTGAACCTTTCTTTGCTTCCTTGATGAACTCGTCGAACTTTCAAGAACTTGAATTGGCCGGAAACGGTCTCGGCGGGAAGCTTCCTCGTATTATAGGTAGTCTTCCTTCCGGCGTGCAACATCTTCACCTACAAGAGAATCTCATACATGGCTCTATACCACCTCACATTTCGAACCTCGTCAATTTAACTTTCTTGAAGTTGTCTAGTAACCGAATTAACGGAACAATCCCTCGAAGCCTATGCAAGATTGTTAGGCTAGAGAGGATTTACCTGTCGAACAATTATCTATCTGGTGAAATTCCTTCAACTCTCGGTGATATCAAGCATCTTGGACTACTTGATTTGTCGAAAAACAGGCTTTCTGGTACGATACCGGATAGTTTTTCCAAACTCCCTCAGTTAAGAAGGCTTTTACTTTACGACAACAAACTTTCCGCAACAATTCCTCCGAGTCTAGGAAAATGTGCGAATTTGGAGATTCTAGACCTGTCTCATAACAGAATCACAGGGATGATTCCTTCAGAAGTTGCAGCATTGAGTAGCTTGAAACTATACTTGAATTTATCGAACAACGAGTTACAAGGTCCTTTACCATTAGAACTAACCAAAATGGATATGGTTCTAGCCATTGATGTATCCATGAATAATCTCTCTGGAAGTATTCCACCACAGTTCGAAAATTTCGTAGCATTAGAATATCTTAATCTTTCTGGTAATTCCTTAGAGGGTCCTCTCCCTAATTCTTTAGGACAATTGTCTTATATTCAATCACTTGATGTATCTTCAAACCAATTGAATGGAACAATACCAGAGTCTCTTCAGTTTTGTTCCTATCTCAAAACACTTAACTTCTCTTTCAACAAATTCTCAGGAAATGTCTCAAACAAAGGAGCATTTTCGTCTTTAACCGTAGACTCTTTTCTAGGAAACAATAATCTCTGTGGTCCATTTAAAGGCATGAAACAATGTCATAGGAAAAACAGTTATCATTTGGTGCTTTTGTTAGTTCCTATGTTACTATTTGGCACACCTATGATATGCATGTGTAGAAACTCCATGATAATCAAGGCAAAAGTGAGAAAACAACAGCGAGCCGTTAGTGACGGATGTGACATGGAGGATGAAGAAGAAGATGATGAAACAAAAGATCTCAGGTATCCGAGAATTTCTTATAGACAACTTCGAGAAGCTACCGGAGGGTTCACTGGTTCAAGCCTCATCGGTTCAGGCCGGTTCGGACGGGTTTACAAAGGTGTACTCTTAGATAATACAAGAGTAGCCGTTAAGGTATTAGATACAACAACAAAAACAACAAAAGACGGTGAGATATCACGGAGCTTTAGATGCGAATGCAAGATCCTTAAAAAGATAAGGCACAGAAATTTAATAAGGATCATTAAAATTTGCAGCAAGAAGGAATTTAAGGCTATTGTTCTTCCATTGATGCCAAATGGTAGTCTCGAGAGGAACTTATACGATCGAAACAATGAATTAATCAAGAAGTTGAGTGTGACTCAAATGGTTAGGATTTGCAGTGATGTAGCTGAGGGAACGTGTTATCTGCATCATTACTCTCCTGTGAAAGTAATTCATTGTGATCTTAAGCCTAGTAATATACTACTTGATGATGATTTCACAGCTTTGGTTTCAGATTTTGGAATTTCGAGGGTTCTAAAAGGCGATGATGGCGATAACTCGACATGTAACTCAATATCTTTTAGTTCAACACATGGCTTGTTATGTGGCTCTGTTGGCTATATAGCTCCTGAATATGGAATGGGAAAACATGCTTCAACTGAGGGTGATGTTTACAGTTACGGAGTAATTCTGTTAGAAATAGTGACCGGTAGACGTCCTACCGACATCCTCGTCCACGAAGGCTCTAGCTTGCATGATTGGGTTAAGAGACAATACACACAGCCACACAAACTCGAAAGCATTATTGAACAAGCACTTCAAAGATTCTCTCTTTCTTGCGCGTCAAGGCACGACAACAAAATTTGGGTAGATGTTATGTTGGAACTCATTGAGCTAGGACTACTCTGCACGCAACAGAACCCTTCAACAAGACCGACGATGCTAGATGTAGCATACGAGACGGGGAGGTTGAAGGATCACCTCACTAATTCTTTCGCAAGAGAAAATAATTTAATTCTTTAA 2982 0.385 MMCSFKLTMFLFFFLVIVHTHSRVLVEEHIDIGLVNDKNSLVSFMSCIIFDPENALTSWKSNVDHVCDWSGVKCNNASNNRRIIELDLSGRSLTGTISPSLANLSSLQILDLSRNHLTGHIPRELGYLVHLQELSLSWNFLQGNIPLEFGSLHNMYYLDLGSNQLEGEIPPSLLCNGTSLSYIDLSNNSLVGEIPLNNNKCVLKELKFLLLWSNKLVGQVPLALSNSTKLKWLDLESNMLSGELPSKIICNFPHLQFLYLSYNNFVSHDGNTNLEPFFASLMNSSNFQELELAGNGLGGKLPRIIGSLPSGVQHLHLQENLIHGSIPPHISNLVNLTFLKLSSNRINGTIPRSLCKIVRLERIYLSNNYLSGEIPSTLGDIKHLGLLDLSKNRLSGTIPDSFSKLPQLRRLLLYDNKLSATIPPSLGKCANLEILDLSHNRITGMIPSEVAALSSLKLYLNLSNNELQGPLPLELTKMDMVLAIDVSMNNLSGSIPPQFENFVALEYLNLSGNSLEGPLPNSLGQLSYIQSLDVSSNQLNGTIPESLQFCSYLKTLNFSFNKFSGNVSNKGAFSSLTVDSFLGNNNLCGPFKGMKQCHRKNSYHLVLLLVPMLLFGTPMICMCRNSMIIKAKVRKQQRAVSDGCDMEDEEEDDETKDLRYPRISYRQLREATGGFTGSSLIGSGRFGRVYKGVLLDNTRVAVKVLDTTTKTTKDGEISRSFRCECKILKKIRHRNLIRIIKICSKKEFKAIVLPLMPNGSLERNLYDRNNELIKKLSVTQMVRICSDVAEGTCYLHHYSPVKVIHCDLKPSNILLDDDFTALVSDFGISRVLKGDDGDNSTCNSISFSSTHGLLCGSVGYIAPEYGMGKHASTEGDVYSYGVILLEIVTGRRPTDILVHEGSSLHDWVKRQYTQPHKLESIIEQALQRFSLSCASRHDNKIWVDVMLELIELGLLCTQQNPSTRPTMLDVAYETGRLKDHLTNSFARENNLIL* 994
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g0153 993 SMART serkin_6 675 982 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g0153 993 Pfam Protein kinase domain 678 970 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g0153 993 ProSiteProfiles Leucine-rich repeat profile. 431 452 IPR001611 GO:0005515
Psa7g0153 993 SUPERFAMILY Protein kinase-like (PK-like) 658 971 IPR011009 -
Psa7g0153 993 PANTHER LEUCINE-RICH RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN 27 978 - -
Psa7g0153 993 SMART LRR_typ_2 502 526 IPR003591 -
Psa7g0153 993 SMART LRR_typ_2 333 357 IPR003591 -
Psa7g0153 993 SMART LRR_typ_2 252 275 IPR003591 -
Psa7g0153 993 SMART LRR_typ_2 104 128 IPR003591 -
Psa7g0153 993 SMART LRR_typ_2 152 176 IPR003591 -
Psa7g0153 993 SMART LRR_typ_2 430 453 IPR003591 -
Psa7g0153 993 SMART LRR_typ_2 405 429 IPR003591 -
Psa7g0153 993 SUPERFAMILY L domain-like 280 580 - -
Psa7g0153 993 Pfam Leucine rich repeat N-terminal domain 36 75 IPR013210 -
Psa7g0153 993 ProSiteProfiles Protein kinase domain profile. 675 983 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g0153 993 SUPERFAMILY L domain-like 41 268 - -
Psa7g0153 993 ProSitePatterns Serine/Threonine protein kinases active-site signature. 803 815 IPR008271 GO:0004672|GO:0006468
Psa7g0153 993 SMART LRR_sd22_2 128 149 - -
Psa7g0153 993 SMART LRR_sd22_2 429 450 - -
Psa7g0153 993 SMART LRR_sd22_2 152 185 - -
Psa7g0153 993 SMART LRR_sd22_2 526 549 - -
Psa7g0153 993 SMART LRR_sd22_2 227 254 - -
Psa7g0153 993 SMART LRR_sd22_2 333 356 - -
Psa7g0153 993 CDD STKc_IRAK 681 977 - -
Psa7g0153 993 Gene3D Ribonuclease Inhibitor 202 601 IPR032675 -
Psa7g0153 993 Pfam Leucine rich repeat 85 139 IPR001611 GO:0005515
Psa7g0153 993 Pfam Leucine rich repeat 359 418 IPR001611 GO:0005515
Psa7g0153 993 Pfam Leucine rich repeat 484 539 IPR001611 GO:0005515
Psa7g0153 993 Gene3D Transferase(Phosphotransferase) domain 1 756 991 - -
Psa7g0153 993 ProSitePatterns Protein kinases ATP-binding region signature. 681 703 IPR017441 GO:0005524
Psa7g0153 993 Pfam Leucine Rich repeat 428 444 IPR001611 GO:0005515
Psa7g0153 993 Gene3D Ribonuclease Inhibitor 35 201 IPR032675 -
Psa7g0153 993 PANTHER OS04G0122200 PROTEIN 27 978 - -
Psa7g0153 993 Gene3D Phosphorylase Kinase; domain 1 645 754 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g0153 Psa-Chr7 11293440 11296585 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g0153 21 970 Receptor kinase-like Gene Family AT3G47110 35.421 6.99e-157 488
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Psa7g0153 Pkinase 2.4e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g0153 - - lang:109346572 1400.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g0153 7 11293440 11296585 Psa7g0153 7 11293440 11296585 ECH