Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g0126 ATGGGGAAGAGGAAGAAGAGAGTCGCTTCGAAAGTATGGTGTTATTACTGCGATCGTGAATTCGACGACGAGAAGATCTTGGTTCAGCATCAGAAAGCTAAGCACTTTAAGTGCCATGTTTGTCATAAGAAGCTTTCAACTGCTGGTGGTATGTCCATTCACGTTCTCCAGGTCCACAAGGAAAACGTCACCAAGGTGCCAAATGCAAAACCTGGTAGAGAGAGTACAGATGTTGAAATACATGGAATGCAAGGGATTCCACCAGATGTATTGGCTTCTCATTATGGAGATGAAGATGACGATGTTCCATCAAAGACAGGCAAGGTGGATATCCCATCATCTCCATTTTTAGGTGGAATGGTGCCACCTCCTATGGGTGCTGGATATCCTCCACGATCAATGTTGGGAACAATTCGACCAATTTATAATCCTGCTCTACCGGTACCTCCTAATGCTTGGGGAGTGGCTCCACCTCGACCTCAGCAATGGTTTCCTCAGCCTCCAGCTGCTTCAATTCCCCCTCCTGTTCCATACGCACATCAACCATTATTTCCCGTGCAGAATGTGAGGCCTCCAATGCCATCAACTAATTCACCCGCATTTCAAACTCAGATTACTCGAGGGCCTGACGGTTGTAGATGTGGAAGACAGCCAGTTTCACAGCCTTTATTTCCCGTTGTTGGAAATAATCACACAACTGCTCAAAGTTCACCATTTTCTGCTGCACCTCTGTCATCAGCTGTTCCCTCAGTAACTCCTGTATTTTCTTCAAATGTCCCTATTGATGCACATTTGGGCATCAACTCTTCTGTGACAAGTAATTATCAAGCAATAGGGCTTCAAGGCGGGACAGCAAGTAACTCACATTCTTATGCGTCTGGCCCAAATACCGGTGGTCCTTCAATTGGACCTCCCCCAGTAATCTCAAACAAAGCTCCTGCTTCTCAGCCTGCCACTAACGAAGTCTACTTAGTTTGGGATGACGAGGCAATGTCCATGGAGGAAAGAAGAATGTCTTTAACAAAATATCAGGTGCATGATGAAAGTAGCCAGATGAGCTCCATTGACGCAGCCATAGATAAGAGGATACTTGAAAGCAGACTGGCTGGGCGTATGGCATTTTAG 1125 0.4596 MGKRKKRVASKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMSIHVLQVHKENVTKVPNAKPGRESTDVEIHGMQGIPPDVLASHYGDEDDDVPSKTGKVDIPSSPFLGGMVPPPMGAGYPPRSMLGTIRPIYNPALPVPPNAWGVAPPRPQQWFPQPPAASIPPPVPYAHQPLFPVQNVRPPMPSTNSPAFQTQITRGPDGCRCGRQPVSQPLFPVVGNNHTTAQSSPFSAAPLSSAVPSVTPVFSSNVPIDAHLGINSSVTSNYQAIGLQGGTASNSHSYASGPNTGGPSIGPPPVISNKAPASQPATNEVYLVWDDEAMSMEERRMSLTKYQVHDESSQMSSIDAAIDKRILESRLAGRMAF* 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g0126 374 PANTHER ZINC FINGER PROTEIN 207 1 374 - -
Psa7g0126 374 PANTHER BUB3-INTERACTING AND GLEBS MOTIF-CONTAINING PROTEIN ZNF207 1 374 - -
Psa7g0126 374 ProSitePatterns Zinc finger C2H2 type domain signature. 14 35 IPR013087 -
Psa7g0126 374 SMART c2h2final6 36 59 IPR013087 -
Psa7g0126 374 SMART c2h2final6 12 35 IPR013087 -
Psa7g0126 374 ProSitePatterns Zinc finger C2H2 type domain signature. 38 59 IPR013087 -
Psa7g0126 374 Gene3D Classic Zinc Finger 2 66 - -
Psa7g0126 374 ProSiteProfiles Zinc finger BED-type profile. 7 66 IPR003656 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g0126 Psa-Chr7 8757228 8761432 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g0126 1 354 C2H2 Transcription Factor Family AT1G30970 61.918 7.07e-136 391
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Psa7g0126 None None None