Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g0122 ATGGATCCATCACTTCCCTTATCACAAAAACAACAATATCATGATTCCAAGCTCCGCCTCATGTGCAGCTACGGCGGCCACATCAAGCCATTCGACAACTCACTCTTCTACATCGGCGGAGACACTCGCATAGTCACCGTCGATCGCCACTCCTCCTTAACACAGATCTGTTCTCATCTCTCTCAGACACTCCTTCACGGTAGAAAACCTTTCACTCTCAAGTACCATCTTCCCAATGAAGACCTCGATAATCTCATCACTGTTTCCACCAACGAAGACCTCCAGAACATGATCGAAGAATACGATAGTTTGTCTTCAAACCTTTCACCTTATCCTTCTCGACTCAGATTGTTCCTGTTTTTATCCAAACCAGAAACCGCTGTTTCTATGGGCAACTACGATAACTCAGACGATCATGCGTGGTTTGTGGAGGCTCTCAACAACTCAGGTATTCTGTCCCGAGTCGTTACTGATTCCGCTACCATGGTTGATAATAATTGCCTGCTCAACCTTGATGATGATGATCATCATGTTAATACTAATAGTACTAGTGTTAAGGAGCATTTGATTGATATGGATTACTCGGTGCCTGTGGAAGAGAAAGACAACATGTTTAACTATTCTTCTATTGCTAAGCTTTCTCCAATAGAAGTTGATGATATCAAAAGTGAAGTATCTGATAAAAACCAGCAACATCAATCTGTGTATATTCATGGTCCTTCTGGTACAGGTCAGGTTCCAATATCATCTTACTACCCAATTTATGCACCACAATCATACCAACAACTTCATCAATACCCAGTTTATAAAACTTCAGTGGGGTCAAATCCTGCTTTTGTTCAAATACCTTCCAATCAATTTCAGCAGTATGTAAGTTTGCCTCAAAATCTAAATATCCATCAGACTATTTTTGGTTATGAATATAGTGGAGCTAAGCAAGAGCAAGTATACTACGCACGACAACATCATGCAGACACAATTGCACCACCTCAGGACAGCAATCCATGA 1008 0.4127 MDPSLPLSQKQQYHDSKLRLMCSYGGHIKPFDNSLFYIGGDTRIVTVDRHSSLTQICSHLSQTLLHGRKPFTLKYHLPNEDLDNLITVSTNEDLQNMIEEYDSLSSNLSPYPSRLRLFLFLSKPETAVSMGNYDNSDDHAWFVEALNNSGILSRVVTDSATMVDNNCLLNLDDDDHHVNTNSTSVKEHLIDMDYSVPVEEKDNMFNYSSIAKLSPIEVDDIKSEVSDKNQQHQSVYIHGPSGTGQVPISSYYPIYAPQSYQQLHQYPVYKTSVGSNPAFVQIPSNQFQQYVSLPQNLNIHQTIFGYEYSGAKQEQVYYARQHHADTIAPPQDSNP* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g0122 335 CDD PB1_UP2 21 120 - -
Psa7g0122 335 Pfam PB1 domain 32 120 IPR000270 GO:0005515
Psa7g0122 335 PANTHER OS05G0427100 PROTEIN-RELATED 12 225 - -
Psa7g0122 335 PANTHER OS05G0427100 PROTEIN-RELATED 268 328 - -
Psa7g0122 335 PANTHER OCTICOSAPEPTIDE/PHOX/BEM1P FAMILY PROTEIN 268 328 - -
Psa7g0122 335 PANTHER OCTICOSAPEPTIDE/PHOX/BEM1P FAMILY PROTEIN 12 225 - -
Psa7g0122 335 SMART PB1_new 30 122 IPR000270 GO:0005515
Psa7g0122 335 Gene3D - 36 121 - -
Psa7g0122 335 SUPERFAMILY CAD & PB1 domains 32 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g0122 Psa-Chr7 8635631 8636929 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g0122 17 148 MAP Kinase Kinase Kinase AT3G46920 39.130 5.72e-21 92.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g0122 - - cam:101509962 319.701