Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g0110 ATGAGTCTTCGGTTGAAGATGCAGAATCATCATCGCCATCCTTTGGCTTTGTCGAGGTTACAAGAACAAACGGGGAACAAACGATACACGTTCATTCAAGCGCATAGAGGCTGGCTTTTGAGGTTTTTGTTGCTATGGATTCTTCTGATGGCGGTAATTAGTTATTGTATCTATAGCAATATGGATGTGGATTCTAAAGTTAGAAGGAAAGAGGTTTTGGGGAGTCTTTGTGATCAAAGGGCTAGAATGTTGCAGGATCAGTTCAGTGTTAGTGTTAACCATGTTCATGCTCTTGCCATTCTTGTTTCGACTTTTCATTATTACCGAAACCCTTCTGCTATAGACCAGGAAACCTTTGCGGAATATACGGCTAGGACTGCGTTTGAAAGGCCGTTACTTAGTGGAGTAGCGTATGCGCAGAGAGTGGTTAATTCGGAAAGGGAGCGATTTGAGAAGCAACATGGAGTGGTTATAAAGACAATGGAAAGAGAGGCTTCGCAGGTTAGAGATGAGTATGCACCGGTCATATTTGCTCAAGAAACTGTCTCTTATCTCGAGTCTATTGATATGATGTCTGGCGAGGAGGACCGAGAAAACATTATGAGAGCTCGAGCTACTGGGAAAGCCGTTCTGACTAGTCCTTTTAGGCTGTTGGGTTCTCATCATCTTGGTGTGGTTTTAACATTTCCTGTTTACAAATCGAAGCTTCCTCCAAATCCAACAACCGAAGAGCTCATTAAAGCGACGGCAGGATATGTCGGAGGATCCTTTGATGTTGAGTCCCTTGTGGAGAATTTACTCGGTCAACTTGCTGGTCACCAAGCAATTTTGGTGAATGTATATGATATCACGAACTTTACTGACCCTCTTATCATGTACGGCAACCAATACGAAGAAGGTGATGTTTCTCTTGTTCATGAAAGTAAGCTTGATTTCGGAGATCCATACCGGAAACATCAAATGATATGTAGGTATCACCAGAAGGCACCGACAAATTGGGTAGCTCTTACCACTGCATTCCTATTCTTTGTCATTCTTTTGTTAGTCGGTTACATTTTATACGGTGCTGGCAATCATATTGTCAAAGTAGAGGACGATTTCCATGAAATGGAGGAATTGAAAGTTCGAGCTGAAGCAGCTGATGTTGCCAAGTCACAGTTTCTAGCTACTGTCTCTCATGAAATTAGAACACCGATGAATGGCATTTTAGGAATGCTTGGTCTGCTTCTACGCACGGAATTGAATTCTACCCAACGGGATTATGCTCAGACAGCTCAAGCATGTGGGAAGGCACTGATAGCATTAATAAATGAAGTACTTGACCGAGCTAAAATCGAAGCTGGAAAGTTAGAGCTAGAAGCGGTTCCATTTGACCTTCGTTCCATACTCGACGATGTCCTTTCTCTCTTTTCCGAGAAGTCTAGACACAAAGGTTTAGAGCTGGCAGTGTTTGTTTCTGATAAAGTTCCGGATATTGTTATGGGAGATCCTGGGAGATTCCGACAAATAGTAACGAATCTTGTCGGAAATTCTGTTAAATTCACCGAGCGAGGACATATATTCGTTAAAGTCCATTTAGCTGAAAATAGAAAGTCCGCAATGAATGGAAAATTCGAGACTTTTCGAAACGGAGGATCTGAAGAAGTTATGCATATATCCGGTGGCTATAATCTCAAAACCTTGAGTGGATGTGAAGCGGCTGATGAGCGCAACAACTGGGATAATTTTAAGCATCTAATCGCCGATGAAGAGTTTTTCTGCGACACATCGACCAAAAAAGTGGCCACTAACGAATCTTATGAGCAAGTAACATTGATGGTCTGTGTCGAAGACACTGGAGTTGGAATCCCATTCTCGGCACAAGATAGGATTTTCATGCCATTTGTGCAGGCGGATAGCTCAACTTCTAGAAACTACGGTGGTACCGGCATCGGCTTGAGTATCAGTAAATGCCTGGTTGAACTTATGGGCGGTGAAATAAACTTTATAAGCCGGCCGCAGGTTGGAAGCACTTTTTCATTTACCGCGGATTTTAAAATATTTAAGAAGAATTTAATACCCAACGTGAAGAAGGTTAATTATGAAGATCTACCTTCGAGTTTCGGAGGACTTAAAGCCATCGTGGTTGATGGAAAACCTGTCAGAGCTGCCGTAACTCGATATCATTTGAAGAGACTTGGGATACAAGCTAAAGTCGCAAATGCCATCAATAAAGCTGTTTCTTTATGCGGGAAAAACGGTTCTTTGACTACAGGATTATTCCAGCCTGATATTATTTTTGTCGAGAAAGATTCATGGGTTTGTGGAGAGGATGTGCGGCAACTAGATTGGAAGCAAAACGGACATATATTTAAGATGCCTCAAATGATCCTTCTTGCGACGAATATCAGCAACGACGAATTCGACAGAGTGAAATCCGCAGGTTTCAGCGACACGGTGATCATGAAGCCGCTGAGAGCGAGTATGGTGGGAGCTTGTCTTCAGCAAGTTTTGGGGACAGGCAAGAAGAGACAGCTAGGAAAAGAAATGCCTAACGGTTCAACTTCCGTTCGAGGCCTTCTTTTCGGAAAGAAAATTTTGGTGGTTGATGACAATGGAGTGAACCGTAGAGTAGCTGCGGGCGCGCTGAAAAATTTCGGAGCCGACGTGAAGTGCGCAGATAGCGGCAAAGCGGCTCTTGAAATGCTTCAATTCCCGCACGATTTTGACGCTTGCTTCATGGATATTCAAATGCCCGAAATGGATGGATTTGAAGCGACTCGACGGATTCGGGGGATGGAGGGGAACGAGAAGACGAACGGTGAGTTCCACTTACCGATATTGGCGATGACGGCGGATGTAATCCATGCAACATATGAAGAGTGTTTGAAATGTGGAATGGATGGATATGTGTCAAAACCATTTGAAGAAGAGAATCTTTATCAAGCAGTTGCAAAGTTTTTCAAAACAAAAGCTACTAGTACCACAATAGATTCATAA 2979 0.43 MSLRLKMQNHHRHPLALSRLQEQTGNKRYTFIQAHRGWLLRFLLLWILLMAVISYCIYSNMDVDSKVRRKEVLGSLCDQRARMLQDQFSVSVNHVHALAILVSTFHYYRNPSAIDQETFAEYTARTAFERPLLSGVAYAQRVVNSERERFEKQHGVVIKTMEREASQVRDEYAPVIFAQETVSYLESIDMMSGEEDRENIMRARATGKAVLTSPFRLLGSHHLGVVLTFPVYKSKLPPNPTTEELIKATAGYVGGSFDVESLVENLLGQLAGHQAILVNVYDITNFTDPLIMYGNQYEEGDVSLVHESKLDFGDPYRKHQMICRYHQKAPTNWVALTTAFLFFVILLLVGYILYGAGNHIVKVEDDFHEMEELKVRAEAADVAKSQFLATVSHEIRTPMNGILGMLGLLLRTELNSTQRDYAQTAQACGKALIALINEVLDRAKIEAGKLELEAVPFDLRSILDDVLSLFSEKSRHKGLELAVFVSDKVPDIVMGDPGRFRQIVTNLVGNSVKFTERGHIFVKVHLAENRKSAMNGKFETFRNGGSEEVMHISGGYNLKTLSGCEAADERNNWDNFKHLIADEEFFCDTSTKKVATNESYEQVTLMVCVEDTGVGIPFSAQDRIFMPFVQADSSTSRNYGGTGIGLSISKCLVELMGGEINFISRPQVGSTFSFTADFKIFKKNLIPNVKKVNYEDLPSSFGGLKAIVVDGKPVRAAVTRYHLKRLGIQAKVANAINKAVSLCGKNGSLTTGLFQPDIIFVEKDSWVCGEDVRQLDWKQNGHIFKMPQMILLATNISNDEFDRVKSAGFSDTVIMKPLRASMVGACLQQVLGTGKKRQLGKEMPNGSTSVRGLLFGKKILVVDDNGVNRRVAAGALKNFGADVKCADSGKAALEMLQFPHDFDACFMDIQMPEMDGFEATRRIRGMEGNEKTNGEFHLPILAMTADVIHATYEECLKCGMDGYVSKPFEEENLYQAVAKFFKTKATSTTIDS* 993
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g0110 992 Gene3D - 447 684 IPR036890 -
Psa7g0110 992 Gene3D - 357 446 - -
Psa7g0110 992 Pfam Response regulator receiver domain 859 977 IPR001789 GO:0000160
Psa7g0110 992 Pfam CHASE domain 113 293 IPR006189 -
Psa7g0110 992 PANTHER TWO-COMPONENT HISTIDINE KINASE 24 985 - -
Psa7g0110 992 CDD HisKA 383 444 IPR003661 GO:0000155|GO:0007165
Psa7g0110 992 SUPERFAMILY CheY-like 856 981 IPR011006 -
Psa7g0110 992 Coils Coil 433 453 - -
Psa7g0110 992 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 495 679 IPR003594 -
Psa7g0110 992 ProSiteProfiles Response regulatory domain profile. 858 981 IPR001789 GO:0000160
Psa7g0110 992 ProSiteProfiles Response regulatory domain profile. 705 831 IPR001789 GO:0000160
Psa7g0110 992 SMART REC_2 857 977 IPR001789 GO:0000160
Psa7g0110 992 Gene3D CHASE domain 114 329 IPR042240 -
Psa7g0110 992 SUPERFAMILY CheY-like 701 832 IPR011006 -
Psa7g0110 992 ProSiteProfiles CHASE domain profile. 110 322 IPR006189 -
Psa7g0110 992 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 369 449 IPR036097 GO:0000155|GO:0007165
Psa7g0110 992 CDD HATPase_EvgS-ArcB-TorS-like 500 678 - -
Psa7g0110 992 Pfam His Kinase A (phospho-acceptor) domain 383 448 IPR003661 GO:0000155|GO:0007165
Psa7g0110 992 Gene3D - 61 113 - -
Psa7g0110 992 PANTHER HISTIDINE KINASE 4 24 985 - -
Psa7g0110 992 Gene3D - 854 989 - -
Psa7g0110 992 PRINTS Bacterial sensor protein C-terminal signature 605 619 IPR004358 GO:0016310|GO:0016772
Psa7g0110 992 PRINTS Bacterial sensor protein C-terminal signature 623 633 IPR004358 GO:0016310|GO:0016772
Psa7g0110 992 PRINTS Bacterial sensor protein C-terminal signature 640 658 IPR004358 GO:0016310|GO:0016772
Psa7g0110 992 PRINTS Bacterial sensor protein C-terminal signature 664 677 IPR004358 GO:0016310|GO:0016772
Psa7g0110 992 SMART HKATPase_4 495 680 IPR003594 -
Psa7g0110 992 CDD REC_hyHK_CKI1_RcsC-like 859 977 - -
Psa7g0110 992 SMART HisKA_10 383 448 IPR003661 GO:0000155|GO:0007165
Psa7g0110 992 SMART CHASE_2 110 295 IPR006189 -
Psa7g0110 992 ProSiteProfiles Histidine kinase domain profile. 390 680 IPR005467 -
Psa7g0110 992 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 437 675 IPR036890 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g0110 Psa-Chr7 7686083 7691758 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g0110 25 989 Histidine Kinase Gene Family AT2G01830 71.633 0.0 1385
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Psa7g0110 HATPase_c 8.7e-31 CL0025
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g0110 K14489 - gmx:100818481 1657.11