Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g0105 ATGATAAAACTTGAATTGGATTTTAGAGGCTCTTACAATTTGGTTATACTTTTGGTGTTTTCTATTGTAATTATCCCTACAACATGTCAAGATGCAGATGTTATGAATATTTTGAAAAGCACCATAAATTCTCCACTTACCTTCCAATGGACAGATCCCGACGTATGCAAATGGAGACGTATTCAATGTGATTCCAACAAACGCGTGACTGCAATTCAATTAGGGAGCCAGACTCTTCAAGGTTTTCTCCCGAAGGAACTTGGGAAGTTGACGAATTTACAACGGTTCGAGTGTCAGAGCAACGCCCTCACGGGCGCATTCCCTTACCTCTCGAAATCATTACAGAGGCTTGTAATTCACGACAACAAATTCAGTTTCATTCCCGGCGATTTCTTCACGGGAATGAGCAATTTGCAAGAAGTAAGAATTGACGATAACCCGTTTTCTCCATGGCAGATTCCTAATTCTCTTAGAGATTGTGTTGCACTCCAAACCTTCAGTGCTCAAAGTGCTGGAATTGTTGGGACCATCCCAAACTTTTTTGGCAGAGATGGTCCTTTCCCGGGCTTGATTTTCTTGGCACTGTCTAATAATTTTTTAGAAGGTGTTTTGCCTGCAAGTCTTTCCGGAAGTTCAATAGAGACTCTTTTGGTGAATGGCCAAAATGGCAATAATAAACTCAATGGTACCCTTGCTGTGATACAAAATATGGAGTCTTTGAAACAAATATGGGCTAATGGTAACTCGTTTACCGGTCCTATACCTGATTTATCGCGCCTTCATCAATTATCTGATGTAAATTTAAGAGATAACCAGTTGACAGGTGTTGTTCCGCCTTCTCTTGTGAATCTCCCGAGTTTGCAAGTGGTGAATTTAACAAACAATTATCTTCAAGGTTCACCTCCCAAGTTTAGAGACGGTGTTGGAGTTGATAATAATATGGAAGGGAGTAGAAATCAATTCTGCACCAATGTTTCGGGGCAGCCATGTAGTTCTCTTGTGAATGTTTTGTTATCAGTTATTGAACCTTTGGGTTATCCTTTGAAGTTTGCTGAAAGTTGGCAGGGGAATGATCCATGCGCTAATAAATGGTTAGGTGTAGTTTGTTCTGGTGGAAATATTTCAGTTATAAATTTTCAGAGCATGGGAATAACTGGAACTATTTCTCCTAGTTTTGCTAGTCTTTCGTCTTTGACAAAATTGCTTCTCGCCAACAATAGTCTCGCCGGTACTATACCGAATCAGCTTACTAGTATGCCTCTTCTGCAAGAATTGGATGTTTCTAATAATCATTTGTATGGTCGTGTTCCATCGTTTCCTAAAGGCGTGGTTCTGAAATTTGGTGGAAACCCTGATATTGGAAAGGATAAACCCAGTACTACTGCAAGTAGCTACGGGTTTGAAGGTAGTGGTAGTAAAAACAATGCTGTTGGCATCACAATTATGATTTTGGTGGGGGCTATTGTTTTACTTGGTGTTGGGGCATTACTATTTATTAAGTTTTGGAAAAGGCCGGACAATGATTGGAGGAAAAGTAGAAGTCGTCATGAAATTATGGTGGATCATAAATATCAATGGGATGAAAATGTTTTGAATGCAAGTGTTGCTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGAGGGAGGTGGTGCGTTAAGCCCCACTGGTAACATGGTGATTTCAATTCAAGTTTTGAGACAAGTTACATATAATTTTCGCAAGGAAAACATTATCGGAAAGGGTGGTTTTGGAACGGTTTACAAAGGGGAATTGCACGACGGGACACAAATTGCAGTGAAAAGGATGCAATCAGGAATAACGGACGAGACAAAACCAAATGAGTTCACATCAGAGATCGCGGTGCTTACGAAAGTTCGACATAAACATTTGGTTGCACTCTTAGGATATTGCTTGGATGGAAATGAAAGACTTTTGGTCTATGAGTACATGCCTCAAGGTGCTCTAAGTAAACACTTATTCAATTGTAAAGAGGAAGGGATAAAACCATTAGAATGGAAGACAAGGCTTAGTATTGCATTGGATGTTGCTAGAGGTGTGGAATATCTTCATGGATTGACCGAACAAATTTTTATCCATAGGGATCTTAAACCATCTAACATTTTACTTGGAGAGGATATGCGGGCTAAAGTATCTGATTTTGGATTGGTTCGACTTGCTCCCGAAGGAAAAGCTTCATTTCAAACTAGACTTGCCGGAACTTTTGGATATATGGCACCAGAGTATGCAGCCATGGGAAGACTAACAACAAAGGCAGATGTATATAGTTTTGGTGTAATTCTGATGGAGATGGTAACAGGAAGGAAAGCGCTTGATGAGAGCCAACCAGAAGAGAACATCCATCTTGTAACATGGTTTCGCCGGATGTTATTGAATAAGGATTCATTTCAAACGATGATTGACCAGACAATTGAAATCGATGAAGAAACATATGAAAGCATCAACACTGTTGCCGAGTTGGCAGGGCATTGTAGTGCAAGGGAGCCTTATCAGCGACCGGATATGAGTCATGTAGTGAATGTGTTATCATCTCTTGTTGAAGTATGGAAACCTATAGTGCAAGAAGTTGATGATGTATATGGGATCAACTTTGATATGACATTACCAGAAGCTCTCCAAAGGTGGCAAGCTTTTGAAGGAAAAAGTACCATAAATTTAACACTTTCTCCTTCATCTTTGCAAACTAGTGGTGACAACACACACTCTACTACATCTCCAAATGTCTCTTCATCAAATCCATAA 2760 0.4018 MIKLELDFRGSYNLVILLVFSIVIIPTTCQDADVMNILKSTINSPLTFQWTDPDVCKWRRIQCDSNKRVTAIQLGSQTLQGFLPKELGKLTNLQRFECQSNALTGAFPYLSKSLQRLVIHDNKFSFIPGDFFTGMSNLQEVRIDDNPFSPWQIPNSLRDCVALQTFSAQSAGIVGTIPNFFGRDGPFPGLIFLALSNNFLEGVLPASLSGSSIETLLVNGQNGNNKLNGTLAVIQNMESLKQIWANGNSFTGPIPDLSRLHQLSDVNLRDNQLTGVVPPSLVNLPSLQVVNLTNNYLQGSPPKFRDGVGVDNNMEGSRNQFCTNVSGQPCSSLVNVLLSVIEPLGYPLKFAESWQGNDPCANKWLGVVCSGGNISVINFQSMGITGTISPSFASLSSLTKLLLANNSLAGTIPNQLTSMPLLQELDVSNNHLYGRVPSFPKGVVLKFGGNPDIGKDKPSTTASSYGFEGSGSKNNAVGITIMILVGAIVLLGVGALLFIKFWKRPDNDWRKSRSRHEIMVDHKYQWDENVLNASVAGGGGGGGGGGEGGGALSPTGNMVISIQVLRQVTYNFRKENIIGKGGFGTVYKGELHDGTQIAVKRMQSGITDETKPNEFTSEIAVLTKVRHKHLVALLGYCLDGNERLLVYEYMPQGALSKHLFNCKEEGIKPLEWKTRLSIALDVARGVEYLHGLTEQIFIHRDLKPSNILLGEDMRAKVSDFGLVRLAPEGKASFQTRLAGTFGYMAPEYAAMGRLTTKADVYSFGVILMEMVTGRKALDESQPEENIHLVTWFRRMLLNKDSFQTMIDQTIEIDEETYESINTVAELAGHCSAREPYQRPDMSHVVNVLSSLVEVWKPIVQEVDDVYGINFDMTLPEALQRWQAFEGKSTINLTLSPSSLQTSGDNTHSTTSPNVSSSNP* 920
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g0105 919 PANTHER TRANSFERASE, PROTEIN KINASE RLK-PELLE-LRR-IX FAMILY-RELATED 10 913 - -
Psa7g0105 919 SUPERFAMILY Protein kinase-like (PK-like) 554 858 IPR011009 -
Psa7g0105 919 ProSitePatterns Protein kinases ATP-binding region signature. 578 600 IPR017441 GO:0005524
Psa7g0105 919 ProSitePatterns Serine/Threonine protein kinases active-site signature. 697 709 IPR008271 GO:0004672|GO:0006468
Psa7g0105 919 SMART LRR_typ_2 395 418 IPR003591 -
Psa7g0105 919 SMART LRR_typ_2 284 306 IPR003591 -
Psa7g0105 919 SMART LRR_typ_2 112 134 IPR003591 -
Psa7g0105 919 SMART LRR_typ_2 187 210 IPR003591 -
Psa7g0105 919 SMART LRR_typ_2 419 446 IPR003591 -
Psa7g0105 919 SMART LRR_typ_2 260 283 IPR003591 -
Psa7g0105 919 Gene3D Transferase(Phosphotransferase) domain 1 650 866 - -
Psa7g0105 919 ProSiteProfiles Protein kinase domain profile. 572 852 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g0105 919 SUPERFAMILY L domain-like 333 439 - -
Psa7g0105 919 Gene3D Ribonuclease Inhibitor 333 457 IPR032675 -
Psa7g0105 919 Pfam Protein tyrosine and serine/threonine kinase 575 847 IPR001245 GO:0004672|GO:0006468
Psa7g0105 919 SUPERFAMILY L domain-like 30 304 - -
Psa7g0105 919 CDD STKc_IRAK 578 851 - -
Psa7g0105 919 PANTHER OSJNBA0070M12.3 PROTEIN 10 913 - -
Psa7g0105 919 Gene3D Phosphorylase Kinase; domain 1 551 649 - -
Psa7g0105 919 SMART serkin_6 572 852 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g0105 919 Pfam Leucine rich repeat N-terminal domain 337 370 IPR013210 -
Psa7g0105 919 Pfam Leucine rich repeat N-terminal domain 30 64 IPR013210 -
Psa7g0105 919 Gene3D Ribonuclease Inhibitor 29 328 IPR032675 -
Psa7g0105 919 MobiDBLite consensus disorder prediction 896 919 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g0105 Psa-Chr7 7106667 7110049 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g0105 72 848 Receptor kinase-like Gene Family AT1G09970 30.072 5.67e-81 280
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Psa7g0105 Pkinase 1e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g0105 - K00924 gmx:100788903 1271.91