Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g0094 ATGGATATCGAAGAGGACATTCGGTCTTTACAGCTTGACTCAGCAGAAGACATAAATGGGGTTGTAAATCCAGAAGATGAGAAGCCAGATGTTGATAATTTAGATAAGATGGATGAAGATCCAAAGCAGGAGGTTCAGACTCAGGCGGTTGAGGCCGACCCAAAAGCAAATGATAATGAAATTCAGGCTGTTGAGGCCGAGCCCAAAGCAAAAGATAAGGAAATTCCTTCAGTTCAAGATGAAGAAGTTGAGCAGATGGAGAAAAGGCACTTGAATGTTGTGTTTATTGGCCATGTTGACGCTGGCAAGTCTACAACTGGAGGCCAGATACTTTTCCTTAGTGGTCAGGTTGATGATCGAACTATCCAAAAATATGAGAAAGAAGCTAAGGACAAAAGTAGAGAAAGCTGGTACATGGCTTATATTATGGACACAAATGAGGAGGAAAGAGCAAAGGGGAAGACAGTTGAAGTTGGAAGAGCACACTTTGAGACAGAGACAACAAGGTTCACCATTTTGGATGCACCCGGCCACAAGAGCTATGTTCCTAATATGATCAGTGGTGCATCTCAAGCTGACATTGGAGTGTTGGTAATTTCTGCTCGGAAGGGAGAGTTTGAAACTGGATATGAGAGAGGTGGACAAACTCGTGAACATGTCCAGCTTGCAAAAACATTGGGTGTGACTAAGCTGCTCGTGGTTGTCAATAAAATGGACGATCCTACAGTAAACTGGTCAAAAGAAAGGTATGATGAAATCGAGTCAAAGATGATTCCATTTCTAAGGCAATCTGGATACAATGTAAAGAAAGATGTCTCGTTTTTACCAATATCGGGGCTCATGGGTTTAAACTTAAAAACTAGAATGGATAAAAGCAGTTGTCCATGGTGGGACGGGCCTTGCTTATTTGAAGCCCTTGATAGTATCGACGTTCCTATGGGAGATCCCAAAAATCCTTTCAGGATGCCTATAATTGACAAGTTCAAAGACATGGGAACTGTTACTATGGGCAAAGTTGAATCTGGGACTATCCGTGAGGGAGATTCCCTTTTCATCATGCCAAATAAGGATCAAGTTAAAGTTATTGCTGTATATATTGATGAAAATCGGGTTAAACGTGCCGGACCTGGTGAAAATTTACGGGTTCGAGTATCTGGTGTTGAAGAAGAAGACATATCATCTGGGTTCGTCCTTTGTAGTGTTGCAAATCCAATACCAGCAGTTACCGAGTTTGTTGCTCAGTTGGCAATACTTGAATTATTGGACAATGCTATTTTTACTGCTGGATACAAGGCTGTTCTGCATGTCCACTCTGTAGTTGAGGAATGTGAGATTGTTGAACTATTGCAACAAATTGACCCAAAGACAAGGAAGCCTATGAAAAAGAAAGTTCTCTTTGTAAAGAACGGTGCTGTTGTATTATGCCGTGTTCAGGTGCATTTTTTTTACATCACAAGCGTGGAAGCTAATTTACATATTTTTTTATTGGTTGACAATCTTTTATTGACTTGA 1512 0.4087 MDIEEDIRSLQLDSAEDINGVVNPEDEKPDVDNLDKMDEDPKQEVQTQAVEADPKANDNEIQAVEAEPKAKDKEIPSVQDEEVEQMEKRHLNVVFIGHVDAGKSTTGGQILFLSGQVDDRTIQKYEKEAKDKSRESWYMAYIMDTNEEERAKGKTVEVGRAHFETETTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFETGYERGGQTREHVQLAKTLGVTKLLVVVNKMDDPTVNWSKERYDEIESKMIPFLRQSGYNVKKDVSFLPISGLMGLNLKTRMDKSSCPWWDGPCLFEALDSIDVPMGDPKNPFRMPIIDKFKDMGTVTMGKVESGTIREGDSLFIMPNKDQVKVIAVYIDENRVKRAGPGENLRVRVSGVEEEDISSGFVLCSVANPIPAVTEFVAQLAILELLDNAIFTAGYKAVLHVHSVVEECEIVELLQQIDPKTRKPMKKKVLFVKNGAVVLCRVQVHFFYITSVEANLHIFLLVDNLLLT* 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g0094 503 Pfam Elongation factor Tu GTP binding domain 88 289 IPR000795 GO:0003924|GO:0005525
Psa7g0094 503 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 144 159 IPR031157 -
Psa7g0094 503 Gene3D Translation factors 404 490 - -
Psa7g0094 503 SUPERFAMILY Translation proteins 312 404 IPR009000 -
Psa7g0094 503 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 407 476 IPR009001 -
Psa7g0094 503 Gene3D Translation factors 317 402 - -
Psa7g0094 503 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 78 323 IPR027417 -
Psa7g0094 503 MobiDBLite consensus disorder prediction 58 81 - -
Psa7g0094 503 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 88 317 IPR000795 GO:0003924|GO:0005525
Psa7g0094 503 Pfam Elongation factor Tu C-terminal domain 405 479 IPR004160 -
Psa7g0094 503 CDD eRF3_II 319 400 - -
Psa7g0094 503 Pfam Elongation factor Tu domain 2 332 399 IPR004161 GO:0005525
Psa7g0094 503 PANTHER TRANSLATION FACTOR 2 479 - -
Psa7g0094 503 PANTHER BNAA06G12300D PROTEIN 2 479 - -
Psa7g0094 503 PRINTS GTP-binding elongation factor signature 92 105 IPR000795 GO:0003924|GO:0005525
Psa7g0094 503 PRINTS GTP-binding elongation factor signature 151 159 IPR000795 GO:0003924|GO:0005525
Psa7g0094 503 PRINTS GTP-binding elongation factor signature 171 181 IPR000795 GO:0003924|GO:0005525
Psa7g0094 503 PRINTS GTP-binding elongation factor signature 187 198 IPR000795 GO:0003924|GO:0005525
Psa7g0094 503 PRINTS GTP-binding elongation factor signature 231 240 IPR000795 GO:0003924|GO:0005525
Psa7g0094 503 MobiDBLite consensus disorder prediction 21 46 - -
Psa7g0094 503 CDD EF1_alpha 92 312 - -
Psa7g0094 503 MobiDBLite consensus disorder prediction 1 81 - -
Psa7g0094 503 Gene3D - 69 312 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g0094 Psa-Chr7 6671999 6679522 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g0094 87 470 Eukaryotic Initiation Factors Gene Family AT5G60390 38.243 2.35e-85 268
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g0094 K03267 - gmx:100793653 820.846
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g0094 7 6671999 6679522 Psa7g0094 7 6671999 6679522 ECH