Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g0078 ATGGTGAAAGCGGCAAGCGAGAATGGTTCTTCTTCTGTGGCACCTTTCTTGACCAAATGTTACGATATGGTTGAAGATCCTTCCATCGACTCCTCATCTTTTGGTCTCAATCCGATAACAGTTTCATCATCGATAACGTCTCTCTATTCTCTCTCACTCTTCTTCCTAATTACTTCAAACACAACAATTTCTCCAGCTTCGTCAAACAACTCAATATCTATGAAAATTGATATGGATAATTGGGAATTTTCCAATGTAAACTTCATTAGGGGTCAAAAGCATTTGTTGAACAATATACATAGAAGGAGACATCCACATGTTGCAGATCAGCAAAAAGCATCGTCGCAGAAAAATAATTCTGAAGAACCGTCACTAGAAGCGACTAATTCTAGCTTGTGGGGACAAGTGGAGAATCTCAAATCGGATAGAAAAACCATGACACAAAAGTTGGTTAAACAAAAGCAGCACCTTGAATCCTCTAAGAGTAAGTTGCTTCTTTTGAGTGATCATCTGGATGGAATGGAGAAGCATCAACAACAGATGATATCGTTCTTGGTCATGGTCATACAATGCCCCAGATTCCTAGCTCAGCTGCTTCACCCTAAGGAAAATAACTGGCGTTTTGCAGAAGAAGGGAATATGTGGGACCATAGTAACCGAGATGACGAGCCAGTTCCTTCTGATGGAATAATTGTAAATTATAAGCCACATGTAAGTGAAACACTAAAGCTTGTAGTTCCGTTATCTTCTACCTTTAAACCAGAACCCAAACTTTCTGCAGACGAGATGAAAGACTTGTGCATCAGTTCTGAGTTCTTGAAATTGCTCCTAGATGAAAATCCTTTTCCTGAAAACGTTGAAGATACTGATCATGAAAATGAGAGGCACAATGTTAGTGAAATGGAGATGGAACCTATCACGAAAACTTCAAATGAAAGATATTCTTTTGAAGCAATGATTGTAGAAATGGAGAAAACTCAAGCATGA 987 0.388 MVKAASENGSSSVAPFLTKCYDMVEDPSIDSSSFGLNPITVSSSITSLYSLSLFFLITSNTTISPASSNNSISMKIDMDNWEFSNVNFIRGQKHLLNNIHRRRHPHVADQQKASSQKNNSEEPSLEATNSSLWGQVENLKSDRKTMTQKLVKQKQHLESSKSKLLLLSDHLDGMEKHQQQMISFLVMVIQCPRFLAQLLHPKENNWRFAEEGNMWDHSNRDDEPVPSDGIIVNYKPHVSETLKLVVPLSSTFKPEPKLSADEMKDLCISSEFLKLLLDENPFPENVEDTDHENERHNVSEMEMEPITKTSNERYSFEAMIVEMEKTQA* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g0078 328 SUPERFAMILY "Winged helix" DNA-binding domain 11 102 IPR036390 -
Psa7g0078 328 Coils Coil 136 156 - -
Psa7g0078 328 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 1 310 IPR027725 -
Psa7g0078 328 SMART hsfneu3 12 102 IPR000232 GO:0003700|GO:0006355|GO:0043565
Psa7g0078 328 PANTHER HEAT STRESS TRANSCRIPTION FACTOR A-8 1 310 - -
Psa7g0078 328 MobiDBLite consensus disorder prediction 111 128 - -
Psa7g0078 328 MobiDBLite consensus disorder prediction 104 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g0078 Psa-Chr7 5643316 5645201 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g0078 13 283 HSF AT1G67970 35.971 1.12e-43 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g0078 K09419 - gmx:100813694 305.449