Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g0057 ATGTGGATGGTAGGTTACAATGAAGGTAATGACTTCAACAACATGGCTGATTATCCTTTCAATGGAAGAAAACTCAGACCTCTCATTCCAAAGCCTCTCACCTCTTCTTCTCCTAACAACAACATTTCAACTTCCACTACTCCTTCCTTAAACCGCATTCATGGCTCCAATGATTTCTTTTCACAATATCACAATCTTCACCAAGTTGGAGATCAAAGTAAGAGACCGGAGATGAATAACCCGGCTGCGGCTGCGGTTGTGGTGAGTTCGAGATGGAATCCGACACCGGAACAGTTAAGAGCGCTTGAAGAATTATACAGAAGAGGAACAAGAACACCATCTGCTGAACAAATCCAACAAATCACAGCACAGCTTAGAAGATTTGGGAAAATTGAAGGAAAGAATGTTTTCTATTGGTTTCAGAATCACAAAGCAAGAGAAAGACAGAAACGACGGCGTCAAATGGAGTCAGCTGCTGAGTTTGATGGTTCTCTTGAAAAGAAAGACCTAGGCTCAAGTAGGACAGTCTTTGAAGTTGAACACACCAAAAATTGGCTACCATCCACAAACTCCAGTACCAGTACTCTTCCTCTTGCAGAGGAATCTGTTTCAATTCAAAGGATAGCAGCAAAAGCAGACCAGTACTCTAGAACAGATGGATGGGTCCAATTCGATGAAGCAGAAAGAAAAAACTTTATGGAAAGGAATGCCACGTGGCATATGATGCAGTTAACTTGTCCTACCTTCATAAACACCGCACAATATCCTAATAATTCTAATTACATCTCTTCTACAGCAACAGCTAGCATGGCCACCACCACCTCTAGCACAGTAACAACTAGACTCATGGACCCAAAACTCATCAAGAGGACACATGATTTGAGCTTATTCATTTCACCTTTCCACATAAGCAGTAGTAGAATCAACAATAGTAGTCACACTCAGCATGAAGATCATTGTTTGGAATCTGCTCAAACACTTCAACTTTTCCCAATAAGGAACGAAGGAGATAATGGATGCAGTGATGATAGCATTATTAACCAACACAAAGAGACAGAGATATCAGCTTCAGCAATGAATGCACCAAACCAGTTTATTGAGTTTCTACCTTTGAAGAACTGA 1122 0.4091 MWMVGYNEGNDFNNMADYPFNGRKLRPLIPKPLTSSSPNNNISTSTTPSLNRIHGSNDFFSQYHNLHQVGDQSKRPEMNNPAAAAVVVSSRWNPTPEQLRALEELYRRGTRTPSAEQIQQITAQLRRFGKIEGKNVFYWFQNHKARERQKRRRQMESAAEFDGSLEKKDLGSSRTVFEVEHTKNWLPSTNSSTSTLPLAEESVSIQRIAAKADQYSRTDGWVQFDEAERKNFMERNATWHMMQLTCPTFINTAQYPNNSNYISSTATASMATTTSSTVTTRLMDPKLIKRTHDLSLFISPFHISSSRINNSSHTQHEDHCLESAQTLQLFPIRNEGDNGCSDDSIINQHKETEISASAMNAPNQFIEFLPLKN* 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g0057 373 ProSiteProfiles 'Homeobox' domain profile. 95 150 IPR001356 GO:0003677
Psa7g0057 373 Gene3D - 88 150 - -
Psa7g0057 373 CDD homeodomain 91 151 IPR001356 GO:0003677
Psa7g0057 373 SMART HOX_1 87 154 IPR001356 GO:0003677
Psa7g0057 373 Pfam Homeodomain 90 149 IPR001356 GO:0003677
Psa7g0057 373 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 40 373 - -
Psa7g0057 373 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 40 373 IPR044555 GO:0003700|GO:0099402
Psa7g0057 373 SUPERFAMILY Homeodomain-like 90 156 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g0057 Psa-Chr7 3717327 3720225 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g0057 1 373 Wox Gene Family AT3G18010 37.656 1.92e-65 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Psa7g0057 Homeodomain 1e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g0057 - - gmx:100777274 433.335