Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g0047 TTTCTACTTCAAGATATCTCTGGGGAATCACTTGAAGAATTCAAAAGTGAGGTCCAAATAATGAGAAGACTGAGGCATCCAAATGTTGTTCTCTTCATGGGAGCTATAACTCGACCTCCAAATCTTTCCATTGTTACTGAATTTCTTCCGAGAGGGAGTTTGTATAGATTACTTCACCGGCCTAACAGTCAATTAGACGAGCGAAGGCGATTGAGGATGGCCCTGGACGCCGCTCGAGGAATGAACTATTTGCACAACAGCACACCAGTGATAGTGCATCGGGATTTGAAGTCCCCGAACCTTCTTGTCGACAAAAACTGGGTTGTAAAGGTATGTGATTTCGGCTTATCCCGAATGAAGTACAGTACATTCCTTTCTTCAAGATCAACTGCGGGAACAGCCGAGTGGATGGCGCCAGAAGTGTTGAGAAATGAACTTTCAGATGAAAAGTGTGATGTTTTTAGCTACGGAGTCATATTATGGGAGCTCTCTACTTTGCGCCAACCCTGGGGAGGAATGAATCCAATGCAAGTTGTCGGTGCTGTCGGTTTCCAGCATCGTCGTCTTGACATTCCAGACAATGTGGACCCTGCCGTTGCAAATATCATTCGACAGTGTTGGCAGACAGATCCAAAATTGAGACCGACATTTGCTGAAATCATGGCGTTGCTGAAGCCGTTGCAAAAGCCAATTACTGCGTCTCAAGTGCATAGAGCAAATGCTCACGCGCCATCATCGCGAGTTCCTGAAGATCCTGAAGCATAG 765 0.4588 FLLQDISGESLEEFKSEVQIMRRLRHPNVVLFMGAITRPPNLSIVTEFLPRGSLYRLLHRPNSQLDERRRLRMALDAARGMNYLHNSTPVIVHRDLKSPNLLVDKNWVVKVCDFGLSRMKYSTFLSSRSTAGTAEWMAPEVLRNELSDEKCDVFSYGVILWELSTLRQPWGGMNPMQVVGAVGFQHRRLDIPDNVDPAVANIIRQCWQTDPKLRPTFAEIMALLKPLQKPITASQVHRANAHAPSSRVPEDPEA* 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g0047 254 ProSiteProfiles Protein kinase domain profile. 1 228 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g0047 254 Pfam Protein tyrosine and serine/threonine kinase 7 223 IPR001245 GO:0004672|GO:0006468
Psa7g0047 254 PANTHER MAP KINASE KINASE KINASE-LIKE PROTEIN 1 241 - -
Psa7g0047 254 CDD STKc_MAP3K-like 1 224 - -
Psa7g0047 254 Gene3D Transferase(Phosphotransferase) domain 1 51 237 - -
Psa7g0047 254 PIRSF ILK 2 243 - -
Psa7g0047 254 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 1 241 - -
Psa7g0047 254 SMART serkin_6 1 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g0047 254 PRINTS Tyrosine kinase catalytic domain signature 46 59 IPR001245 GO:0004672|GO:0006468
Psa7g0047 254 PRINTS Tyrosine kinase catalytic domain signature 85 103 IPR001245 GO:0004672|GO:0006468
Psa7g0047 254 PRINTS Tyrosine kinase catalytic domain signature 132 142 IPR001245 GO:0004672|GO:0006468
Psa7g0047 254 PRINTS Tyrosine kinase catalytic domain signature 151 173 IPR001245 GO:0004672|GO:0006468
Psa7g0047 254 PRINTS Tyrosine kinase catalytic domain signature 195 217 IPR001245 GO:0004672|GO:0006468
Psa7g0047 254 Gene3D Phosphorylase Kinase; domain 1 1 49 - -
Psa7g0047 254 SUPERFAMILY Protein kinase-like (PK-like) 7 231 IPR011009 -
Psa7g0047 254 ProSitePatterns Serine/Threonine protein kinases active-site signature. 91 103 IPR008271 GO:0004672|GO:0006468
Psa7g0047 254 MobiDBLite consensus disorder prediction 234 254 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g0047 Psa-Chr7 1990188 1991717 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g0047 1 238 MAP Kinase Kinase Kinase AT1G73660 83.193 6.65e-146 432
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Psa7g0047 PK_Tyr_Ser-Thr 1.1e-60 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g0047 - - ccaj:109799481 470.7