Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g0026 ATGGCGAGACTAGAGAGGGATGGCACAAACAAAAGTCTAGAGAGTCTAATGGACTCCCATAAACCAGGAACCGCAACAAATGGGAACCAACTGAGTTCCCAGAAATCCATTCCTGGCTATGGCCTCGAATTCACTAACCTCTCATACAGTATCATAAAGAAGCAGAAAAAAGATGGGGTTTGGATCAACAAAGAAACATTTCTTCTTCATGATATCTCTGGCCAGGCAGTTAAAGGTCAAATTATGGCAATCATGGGGCCTAGTGGTGCTGGAAAATCTACTTTTCTTGATGCTTTGGCCGGACGAATTGCTAGAGGGAGTCTAGAAGGGTCCGTTAGAATTGATGGAAAGCCGGTAACTACAAGCTACATGAAAAGGGTGTCCTCTTATGTGATGCAAGATGACCAGCTCTTCCCTATGCTGACAGTTTTTGAAACATTTATGTTTGCCGCAGAAGTTAGGCTTCCTCCTTCTATTTCCAGGGACGAAAAAAAGAAAAGGGTGCACGAGCTTCTTGATAAATTGGGTTTACAGAGTGCTACACATACCTATATTGGCGACGAAGGAAGGAGAGGAGTGTCGGGAGGGGAACGAAGAAGGGTATCAATCGGCATAGAGATCATTCATAAGCCATCGCTTCTGTTTTTAGATGAACCTACCTCGGGTCTGGATTCTACAAGTGCTTACAGTGTAGTTGAAAAGATTAAAGACATAGCTCAGGGTGGTAGCATTGTCCTCATGACCATACATCAGCCTTCATTTAGAATTCAAATGCTCCTCGACAAGATCACTGTCCTCGCAAGGGGAAGATTGATATACATGGGAAGGCCAGATGCACTTCAGACTCACCTATCCGGATTTGGAAGACCTGTTCCTGATGGAGAAAACAGTATTGAGTATCTTCTAGATGTTATAACTGAATATGATCAAGCAACTGTTGGACTTGACCCTCTTGTCCAATACCAACATGATGGCCATAAGCCTGACATAGCAGCCATGACCCCTGTTCCAAAACCTCCGAATTACAGAAGGAACACCCCAGCATCTAAACACATGATTAGCCTGCGCAGCCAAGGATTCACTGCTGGCACACCACAACCTGATTCTTCACAGTTCGGTCTTGATGATGAGGACGATGATGATGACGAGAATTTTGATAACTCCCTTGAAAGGAGAAGTGTTAAAACACCAAGGAACATAGCGACCAGTGGTGTTTATCCACGTTTAGCTTCTCAGTTCTACCAAGATTTCTCAGCCAAAGATTTCTCTGTCTGGATTTACAATGGTGTAGTAGGAACCCCGCGTCGCCCACCATCATGGACTCCGGCAAGAACTCCGGGATGGACACCGGGGAAAACACCCTTATCAGGACCAAGAAGTTTTGTTTCTAACCAACAGTCTGTATCTTATCAGGAACCCTATCATCACCAAAAAGCGCAGACAGATGTTAGCCAGTCTATGGAGTACTCTGCAACATCATATGCACCATCATATGAAGAGTTTGAGATTGAGGAAGTGCTTGATGAGCCGGACCTTGGAGCCAAGTATGCAAACCCATGGATGCGTGAGGTTGCAGTGCTCTCATGGCGAACGCTACTCAATGTAATTCGAACTCCAGAACTCTTTGCCTCGCGTGAGATTGTGCTGACTGTTATGGCACTTGTCTTATCCACCATTTTCAATAACCTGGGCGATACTACTTTCAAAGACATCAATAGGCTCCTTAATTTCTACATCTTTGCAGTGTGCCTTGTTTTCTTTTCTTCCAATGATGCAGTCCCATCTTTTATCATGGAAAGGTTCATCTTCATCAGGGAAACATCCCACAATGCTTACCGTGCTTCTTCATACGTAATGTCTTCCCTTATTGTTTACCTCCCATTTTTTGCTGTTCAAGGCCTCACATTTGCTGTCATAACCAAATTAATGCTCCACTTGAAAAGCAGTCTATTCAATTTCTGGATGATACTTTTTGCCTCCCTCATTACTACCAATGCGTATGTGATGCTTGTCAGCGCACTTGTGCCTAGTTACATAACGGGTTATGCAGTAGTCATTGCCACAACAGCACTCTTCTTTTTGACCTGTGGTTTCTTCCTCAAGCGAACTCAGATACCTGGATACTGGAAGTGGCTCCACTATATTTCTGCAATTAAATACCCATTTGAGGGATTGCTGATAAATGAATTCAAGAACGATCGCGGCTGCTATACAGGAAACAAAGCAGATTTATCCCCGGGACCTTTAGGAGATGTGAAGCCCAGTAAACACCACAATGCCAGTCTTCCCCTTAACTGCTTGTTAGGAGAAGATGTCTTGTCCACAATGGATATTACAATGGAAAACCTATGGTATGACATCTTAATCCTACTAGCTTGGGGTGTTCTATACAGGTTCTTCTTCTACTTGGTTTTGAGATTCTACTCCAAAAATGAAAGAAAATGA 2445 0.4364 MARLERDGTNKSLESLMDSHKPGTATNGNQLSSQKSIPGYGLEFTNLSYSIIKKQKKDGVWINKETFLLHDISGQAVKGQIMAIMGPSGAGKSTFLDALAGRIARGSLEGSVRIDGKPVTTSYMKRVSSYVMQDDQLFPMLTVFETFMFAAEVRLPPSISRDEKKKRVHELLDKLGLQSATHTYIGDEGRRGVSGGERRRVSIGIEIIHKPSLLFLDEPTSGLDSTSAYSVVEKIKDIAQGGSIVLMTIHQPSFRIQMLLDKITVLARGRLIYMGRPDALQTHLSGFGRPVPDGENSIEYLLDVITEYDQATVGLDPLVQYQHDGHKPDIAAMTPVPKPPNYRRNTPASKHMISLRSQGFTAGTPQPDSSQFGLDDEDDDDDENFDNSLERRSVKTPRNIATSGVYPRLASQFYQDFSAKDFSVWIYNGVVGTPRRPPSWTPARTPGWTPGKTPLSGPRSFVSNQQSVSYQEPYHHQKAQTDVSQSMEYSATSYAPSYEEFEIEEVLDEPDLGAKYANPWMREVAVLSWRTLLNVIRTPELFASREIVLTVMALVLSTIFNNLGDTTFKDINRLLNFYIFAVCLVFFSSNDAVPSFIMERFIFIRETSHNAYRASSYVMSSLIVYLPFFAVQGLTFAVITKLMLHLKSSLFNFWMILFASLITTNAYVMLVSALVPSYITGYAVVIATTALFFLTCGFFLKRTQIPGYWKWLHYISAIKYPFEGLLINEFKNDRGCYTGNKADLSPGPLGDVKPSKHHNASLPLNCLLGEDVLSTMDITMENLWYDILILLAWGVLYRFFFYLVLRFYSKNERK* 815
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g0026 814 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 64 284 IPR027417 -
Psa7g0026 814 ProSitePatterns ABC transporters family signature. 193 207 IPR017871 GO:0005524
Psa7g0026 814 Gene3D - 42 287 IPR027417 -
Psa7g0026 814 PANTHER ABC TRANSPORTER 2 808 - -
Psa7g0026 814 CDD ABCG_EPDR 42 275 - -
Psa7g0026 814 Pfam ABC-2 type transporter 524 730 IPR013525 GO:0016020|GO:0140359
Psa7g0026 814 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 42 293 IPR003439 GO:0005524
Psa7g0026 814 Pfam ABC transporter 69 221 IPR003439 GO:0005524
Psa7g0026 814 SMART AAA_5 78 278 IPR003593 -
Psa7g0026 814 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 2 808 - -
Psa7g0026 814 MobiDBLite consensus disorder prediction 1 32 - -
Psa7g0026 814 MobiDBLite consensus disorder prediction 360 393 - -
Psa7g0026 814 MobiDBLite consensus disorder prediction 437 459 - -
Psa7g0026 814 MobiDBLite consensus disorder prediction 15 32 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g0026 Psa-Chr7 821257 824217 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g0026 20 359 Calmodulin-binding Proteins AT2G36910 22.449 1.88e-10 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g0026 K05681 - gmx:100819497 1305.04