Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g0013 ATGGCACAAGACACAAACTCGGTTGATGTCATTTTGGACTTTCTCAGGAGAAATCAATTCACTACTGTTGAAGAAGCATTACGAACTGACCTCCATAATCATAATAATCACAAAAAGGAGGTGAAATCAAGAGTTCAAACCAGTGATATTATTATAACACCTATACAAGATCACAAACAACACTTTCCTAGCCTTCAACCACTTCATCTCCCTTTGCCTGTTCTTAATTGGGACGACAAATTTGAGCCAGATGTTCCTATTCAACTACCAATTCACTCTTCAGGTATGAAGAGGGCTGCAGCGGGCAGTTGGTTATCCATAAGTCAGGGGATATCAGAGGATACGTCCGATCTTATATCAGGTTTTGCAACAGTTGGTGATGGGTTGAATGAATTTGTTGACCATCCTAACGAGTACTGGGACTCTGATGAATATAATGATGATGATGATGTTGGGTACATGAGACAGCCTATTGAGGATGAGGCCTGGTTTTTGGCACATGAAATTGATTACCCTAGCGACAATGAAAAGGGGACTGATCATGGAAGTGTTCTAGATCCCCGGGAAAGACGTCCAGCCAAAGATGAGGACAATGATCAATCTTTTGTTGAGGAGGATTCTTACTTCTCTGGGGAGCAATATCTTGAGACAAATAATGTTGAACCAGTCACAGCTTCTGATGATCCTATTGGTCTAAAAATTACTGAAATGTATGGAAGGACTAATGGTAATTATTTAATGGCTCAATATGATGGACAATTGATGGATGAAGAAGAATTAAACCTAATGTGTGCAGAACCTATCTGGAAAGGCTTTGTCCCTCAAACAAATGAGCTCATCATGCTAGGAGAAGGGAATATATTGAATGATAGCTTAAGATCACAATTAGAGGATATATATATGGATGATGATCAACACGGTTCGGTTAGGTCGATTGGGGTGGGGGTCAACAGTGATGCTGTAGATGTTGGTAGGGAAGTGCGTGAGACTTTGGTTGGTGATAGTAGTGAAGGGGGTTTAGAATATTTTCATGATCATGATGTTGGGCTTGGTGGTTCTAGACACTCTAATCATGATTTGGATAAGAAAAAGAAAAAGGGAAATGACAAGAGCGTGTCAAATAAATATGTCATAGGAGGTGATAAAGATGCACAGTTGCAGGTGAAAACACATAGCGAACGGAAATTCCCATTTCCCCTAGCTTTGAAGGATGGCCAGATGATTCGGCCTACCTCCGGCAAGTCCCTGGGGTCAAATAACTGCATTGCAGATGAAACTGATAATTATCTTAATGCATTTCTGGAATCTGATGACACTCTTCCTTCATGGAGGCGGAAGAGCAGTGATTCTTTACCCGTTAAAAGTTCCACGGGTGAAAATAATGCCAATACAATAAGATCAACAAACTCTTCTCCAACATCAGCCTCAAATTATGGATGTTCTGAAAGAGATCATGTCAAGCTAGAAGAGAATGAAAAGGTTGGAGTTGCAAGGGAAGATGGTCTAGGGACTCTAGAGGATGAAGAGGCAGCTGTTGTGCAGGAGCAAGTAAGGCAAATAAATGCCCAGGATGAGGAATTTGAAACCTTCGATTTGAAGATTGTGCACAGGAAAAACAGAACTGGCTTTGAGGAGGACAAGAATTTCCACGTTGCTTTAAATTCTATAATAGCTGGAAGGTATCATGTGACCGAGCATCTGGGATCTGCTGCTTTTAGCAAAGCTATACAGGCTCATGACCTGTATACTGGCATGGATGTTTGTGTTAAAATTATAAAGAATAACAAGGACTTTTTTGATCAAAGTCTTGATGAGATCAAGCTTCTCAAGTATGTCAATAAGCACGATCCAGCAGACAAGTATCACCTTCTTCGATTATATGATTATTTCTATTATCGAGAACATTTGTTAATAGTATGTGAACTACTTAAAGCAAACTTGTATGAGTTTCAAAAATTTAATAGAGAATCAGGGGGTGAAGTTTACTTTACGATGCCGAGATTGCAGTCAATTACCATTCAGTGTTTGGAAGCACTTCAATTTTTGCATAGCCTTGGACTGATACATTGTGACTTGAAGCCAGAGAATATATTGGTTAAAAGTTATAGCAGATGTGAGATCAAGGTCATTGATCTTGGAAGTAGTTGTTTTGAGACAGACCACCTTTCTTCGTATGTTCAGTCAAGATCTTATCGTGCTCCTGAAGTTATTTTGGGACTTCCATATGACAAGAAGATTGATATCTGGTCACTTGGCTGCATCTTGGCAGAGCTTTGTACTGGCAATGTTCTTCTTCCAAAACGATTCCCCGGCAACATTACTTGCTCGTGTGGTCGGAATAATTGA 2346 0.3998 MAQDTNSVDVILDFLRRNQFTTVEEALRTDLHNHNNHKKEVKSRVQTSDIIITPIQDHKQHFPSLQPLHLPLPVLNWDDKFEPDVPIQLPIHSSGMKRAAAGSWLSISQGISEDTSDLISGFATVGDGLNEFVDHPNEYWDSDEYNDDDDVGYMRQPIEDEAWFLAHEIDYPSDNEKGTDHGSVLDPRERRPAKDEDNDQSFVEEDSYFSGEQYLETNNVEPVTASDDPIGLKITEMYGRTNGNYLMAQYDGQLMDEEELNLMCAEPIWKGFVPQTNELIMLGEGNILNDSLRSQLEDIYMDDDQHGSVRSIGVGVNSDAVDVGREVRETLVGDSSEGGLEYFHDHDVGLGGSRHSNHDLDKKKKKGNDKSVSNKYVIGGDKDAQLQVKTHSERKFPFPLALKDGQMIRPTSGKSLGSNNCIADETDNYLNAFLESDDTLPSWRRKSSDSLPVKSSTGENNANTIRSTNSSPTSASNYGCSERDHVKLEENEKVGVAREDGLGTLEDEEAAVVQEQVRQINAQDEEFETFDLKIVHRKNRTGFEEDKNFHVALNSIIAGRYHVTEHLGSAAFSKAIQAHDLYTGMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPADKYHLLRLYDYFYYREHLLIVCELLKANLYEFQKFNRESGGEVYFTMPRLQSITIQCLEALQFLHSLGLIHCDLKPENILVKSYSRCEIKVIDLGSSCFETDHLSSYVQSRSYRAPEVILGLPYDKKIDIWSLGCILAELCTGNVLLPKRFPGNITCSCGRNN* 782
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g0013 781 SMART serkin_6 561 779 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g0013 781 MobiDBLite consensus disorder prediction 352 371 - -
Psa7g0013 781 MobiDBLite consensus disorder prediction 175 198 - -
Psa7g0013 781 MobiDBLite consensus disorder prediction 445 480 - -
Psa7g0013 781 MobiDBLite consensus disorder prediction 175 203 - -
Psa7g0013 781 PANTHER - 92 766 - -
Psa7g0013 781 Gene3D Transferase(Phosphotransferase) domain 1 615 768 - -
Psa7g0013 781 Gene3D Phosphorylase Kinase; domain 1 555 642 - -
Psa7g0013 781 ProSitePatterns Serine/Threonine protein kinases active-site signature. 687 699 IPR008271 GO:0004672|GO:0006468
Psa7g0013 781 ProSiteProfiles Protein kinase domain profile. 561 781 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g0013 781 SUPERFAMILY Protein kinase-like (PK-like) 550 769 IPR011009 -
Psa7g0013 781 PANTHER DUAL SPECIFICITY PROTEIN KINASE 92 766 - -
Psa7g0013 781 MobiDBLite consensus disorder prediction 443 483 - -
Psa7g0013 781 Pfam Protein kinase domain 561 766 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g0013 781 CDD PKc_DYRK_like 561 772 - -
Psa7g0013 781 MobiDBLite consensus disorder prediction 352 373 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g0013 Psa-Chr7 513097 519090 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g0013 558 766 MAP Kinase Gene Family AT3G18040 33.480 5.08e-25 107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-PRP4 Psa7g0013 Pkinase 1.8e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g0013 - - gmx:100797095 1150.96