Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g0011 ATGGCTAAGAGATCAGATTTTGCCCAGAAGCTTCTCGATGATCTGCGCCTAAGGAAAGAACGAATCACTGCTACTTCTTCACATTCTAACAACCATTTACCTATAGATGCATATGCATACACCAAGCAAACCTACAGAGGGTCCACAAACACAAGAGCAAATGAAATTGTTAGTTCCAGATGTGGGGAGATGGTGAATAGGTCTAGCAGAGGGCAGAAGTCATTAAAGAATGGAGGAGACTTGTCAAATCAGATTATTCCATACGGGAAAGCCTATCAGAATAATGGAGGGAAACCAAGGAGGGCCGATTTGTCTTTCACCAATTCAATTTTGGGTTTCCTTCACCAAATTCAAAGGGGAACAATGGATAGAGGAAGCAACTTGGACAGACAACTAGCTCCAACTAACCGCACCCTCTCTCTTGTGCAGATAAATGAGATATCCAAAGGCGCACAAAAACTAAACCACATATTGAGAGCTTGTTGCTCCACTGGCGTTAACATGGATACATATTCATTACATTTTGCAAAGGAACTATTAAAAGGAGCTATTGATTTGGAGGAGTCACTTGGGATGCTAGTAGACCTGCAGAAAAATTCAGAGTTTATGACCACCTCTCAAGCGCAGAACAAAAATCGAATCACGCTATTAGAAGAAGAGGAGGAAGAGGATAATGAAGAGGATCAGAGAGGGAGGATGGAGAAAATGCAACTGGCACGTCCAACTTTCTCATTTGACAACCAGATGCAGAGAGCAATTACCATCAGCAACTCTAAGGAAGCCAGAAAGATAAAAGTTTCTCAGCAGAAGCGATTATCAACTAACACGGTTGGAGCTGCTGATATATCAAACCAGACGGCAGACAAGGGAAGGATTCCAAACGTAATAGCCAAACTAATGGGGCTGGACAACCTTCCTGAGAAAAAAGATTCAGGTAATAGTAATATTGCATCATCCAAGCAGTCTGCCAAAGGAAGCAGCAGCACTACACTGAAGACCAAACAAACGGACAAGTTGATCAAAGACCAAAAAGTGGCGGTTGGATCCTTCAAAAATCAAAAGGCTTCCTATTATTCCGAGTCTGAGGTGGTTGGAGTAAAACCATTGAAGGGTTTTGACAAGGCCAGCATCATCAACGGTTCTCCTCGTCATGTTGAGGTGATGACGGGAATGAAACAGGATCTTCAAAATAACAGTGGCATGGTGAAGGGAAGAAGCAACAATCGCAATGATCCGGTTCAAAATCTAAATAATATGCACGAAAGAAGACCACAAGTTAAACCTGCCATTCAGGTTGCAAAAGAAGGACACACGATTACGAACAAGCACATGCAGATGAGCAATGAAAAAAAGTCTCGGGATCATCTTGTAGCTCAAAAGTCAATACTCTCCAAAGGTGGAGGAAGTGAAATGACACCCAACTATTCATTAAAACAATCCGCCAATAATGTTCAGAAGAAGAAGCATCAGTCATCCATAAACCAACCCACACCTTTCAAGAAATCAAGTGATGATCATGATCTAGGTGCATCTAATGAGAAAGTAAAAGAAGTTACTGATAGGAAGAAGTCTTCCCCAAAATATCAAGAATTAGAACGAGCTAAAGGGAGGCAAACACTCAAGGATCATAAATTTGCAGCCAGCAAGAAAATAAAGCCTGAAAAGATGGAACAAATGTTAAGTAGAAGAAATGGACAAGAAGCTAGTGATAGAGCATCTGGCAAATTCAATGTCTTGAATGGAGCGGAGCGAAAAAGGTTTAGCATGTTCATAGAACATGAACTGCTTCCTCCTACTACCTTACACAATTCTGGCAGTGGTAAAGATTTCCAAGAACCGGCCAATGATTTGCAATACCAAGTTGTGAAACCGGCTGCACTCAATTTGCAAGATCGAGCTGTTCCTGAGGCTCCACATGAGGGATTCAAGACTAGTGAAGTTGCATACCATAAAAGTAAAACAAATGGAGTCCGGGAAGACAAAATGGGTGATAAAATACAAGATCAAAATATAAGCATCCAACAACCATTAACAGAAAGTGAAAATCGCCTCAAGTGGATTTTGGTCATGAGTCAATTATTCGTCAATACTGCAGAAGCACTTTTCAGACTAAACATTCCGTTTGGTATTCTTCAAGGTGGTCGTCAAGACAGTCAAGACCAAAGTAGCAAACTGATATTAGATTGTGGCTATGAAGTGATGAAAAGAAAGGGGATTCGGCAAGAACTCAAAGTTCATACTTGTTCAAACATATCATCAATCACAAGTACTGTTAACTCAGTAAGATCCCTAGATGACTTGGTAAGGAAGCTGAATGAAGACATGGAGAAGCTTAAATTGTATGGAAGGAAAAAAAGTAGCCAAGTATATGGTGAGGACTACCTGCCTAAGATGCTTGAGCATGATGTCTATGATAAATGTCCAGACATAGACTGCATGTGGGATTTTGGTTGGAATGATGAAACATTTGCATTTATCGAAAAATATGATGTTATAAGGGAAACAGAAAAGCATATCCTTAGTGTACTTGTGGATGAGATCACCAAAGATTATTGCATGTTAAAGTGA 2568 0.405 MAKRSDFAQKLLDDLRLRKERITATSSHSNNHLPIDAYAYTKQTYRGSTNTRANEIVSSRCGEMVNRSSRGQKSLKNGGDLSNQIIPYGKAYQNNGGKPRRADLSFTNSILGFLHQIQRGTMDRGSNLDRQLAPTNRTLSLVQINEISKGAQKLNHILRACCSTGVNMDTYSLHFAKELLKGAIDLEESLGMLVDLQKNSEFMTTSQAQNKNRITLLEEEEEEDNEEDQRGRMEKMQLARPTFSFDNQMQRAITISNSKEARKIKVSQQKRLSTNTVGAADISNQTADKGRIPNVIAKLMGLDNLPEKKDSGNSNIASSKQSAKGSSSTTLKTKQTDKLIKDQKVAVGSFKNQKASYYSESEVVGVKPLKGFDKASIINGSPRHVEVMTGMKQDLQNNSGMVKGRSNNRNDPVQNLNNMHERRPQVKPAIQVAKEGHTITNKHMQMSNEKKSRDHLVAQKSILSKGGGSEMTPNYSLKQSANNVQKKKHQSSINQPTPFKKSSDDHDLGASNEKVKEVTDRKKSSPKYQELERAKGRQTLKDHKFAASKKIKPEKMEQMLSRRNGQEASDRASGKFNVLNGAERKRFSMFIEHELLPPTTLHNSGSGKDFQEPANDLQYQVVKPAALNLQDRAVPEAPHEGFKTSEVAYHKSKTNGVREDKMGDKIQDQNISIQQPLTESENRLKWILVMSQLFVNTAEALFRLNIPFGILQGGRQDSQDQSSKLILDCGYEVMKRKGIRQELKVHTCSNISSITSTVNSVRSLDDLVRKLNEDMEKLKLYGRKKSSQVYGEDYLPKMLEHDVYDKCPDIDCMWDFGWNDETFAFIEKYDVIRETEKHILSVLVDEITKDYCMLK* 856
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g0011 855 Coils Coil 216 236 - -
Psa7g0011 855 MobiDBLite consensus disorder prediction 500 549 - -
Psa7g0011 855 MobiDBLite consensus disorder prediction 480 549 - -
Psa7g0011 855 MobiDBLite consensus disorder prediction 306 335 - -
Psa7g0011 855 Pfam DUF761-associated sequence motif 291 310 IPR032795 -
Psa7g0011 855 PANTHER OS01G0228800 PROTEIN-RELATED 1 354 - -
Psa7g0011 855 PANTHER OS01G0228800 PROTEIN-RELATED 549 852 - -
Psa7g0011 855 MobiDBLite consensus disorder prediction 480 499 - -
Psa7g0011 855 PANTHER EXPRESSED PROTEIN 1 354 - -
Psa7g0011 855 PANTHER EXPRESSED PROTEIN 549 852 - -
Psa7g0011 855 MobiDBLite consensus disorder prediction 308 334 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g0011 675 854 TRM (TON1 Recruiting Motif) Superfamily AT5G42710 42.308 5.60e-36 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g0011 - - mtr:MTR_8g107730 1276.92