Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g0007 ATGAGGTGGTGCAGCGAGGCTATGACACTGTCACTCCTTCCTTCTCCTGTAGGTTTATTCGGCAATAATAAAAGCGGGGAGTTTCAATTTCAAAAGGCTTTCTTTAAATTGAAATTCAACAACTCCTCTCTTGTTATTCATCGGAACCCGCCGTTGGCTGCTCAAGTAGAAGCGTCAAGTTCAAGGGATTTTGTTGTCGTTAATTTCTACCATTTTGTATTCATCAAAAACCCACAACAACTAGTCGCCAAACACCTCTCTTTCTTGGAATCCGAGGGTCTAGACATCCATGGAAGAATTTATTTGAATGAACAAGGGATTAATGCGCAGTATAGTGGGCCATCCAAAGACGCTATCACGTATGTCAACTGGATAAAAGAGGATACCAGGTTTTCCGACATCCTCCTTCAGATAACTCCATCACAAACTGGACATACCTTTCCATCATTGAAGTTACGCTATAAGCCTTCATTAGTACAGTTTCAAGGTGGCATATCAGATCTTCCATTGCTCAATCCTTCAATGCGGGCGTTACCTTTATCACCTTCAGAATGGAGACATAGATTAGAAGCCATCAATAAAAATGATCCGCATTCAAAAGACATTATATTGGATGTCAGAAATGGTTATGAGTGGGACATTGGACATTTTCGTGGGGCTCAACGGCCTAACGTGGACTGTTTTAGGAGCACTTCATTTGGGTTGTCTCAAGAAGAGATCACTGCTTCAGACCCTTTGTCAAATGTAGATAAAGAAAATGCAAACATATTGATGTATTGCACAGGAGGGATTCGCTGTGATGTGTATTCTACAATACTGAGGCAGCATGGATTTCAAAATTTGTACACTCTAAAGGGAGGTGTTTCTCACTATATAAAGAATGAAGGTGCTGCAGAGTGGGTAGGAAATTTATTTGTATTTGACTCCCGATTGTCTCTCCCTCCTCCTGTGGCCATTCCTGAAGGTAGGATGACTCCAGTTTCTAGTGATGATAAGTTCGCCAAATGCTACACATGTAATGTAGAAGTTAGTGAACTGAGACATCGGAATTGTGCAAATCTTGACTGTAACTTGCTTTTTCTATGCTGCAGAAAATGTGTAAAGGATCTAAAAGGATGTTGTTGTTTGACTTGTACTACTGCCCCTAGGCTTAGACCTGCTTTAATTGGAGAGCAGAGATACAGGAAATGGCACATCTATCGTGACATGGATTTGCAAGGCAAGGAGAATTGA 1233 0.4112 MRWCSEAMTLSLLPSPVGLFGNNKSGEFQFQKAFFKLKFNNSSLVIHRNPPLAAQVEASSSRDFVVVNFYHFVFIKNPQQLVAKHLSFLESEGLDIHGRIYLNEQGINAQYSGPSKDAITYVNWIKEDTRFSDILLQITPSQTGHTFPSLKLRYKPSLVQFQGGISDLPLLNPSMRALPLSPSEWRHRLEAINKNDPHSKDIILDVRNGYEWDIGHFRGAQRPNVDCFRSTSFGLSQEEITASDPLSNVDKENANILMYCTGGIRCDVYSTILRQHGFQNLYTLKGGVSHYIKNEGAAEWVGNLFVFDSRLSLPPPVAIPEGRMTPVSSDDKFAKCYTCNVEVSELRHRNCANLDCNLLFLCCRKCVKDLKGCCCLTCTTAPRLRPALIGEQRYRKWHIYRDMDLQGKEN* 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g0007 410 CDD RHOD_YceA 180 293 - -
Psa7g0007 410 PANTHER THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2 59 408 - -
Psa7g0007 410 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 180 311 IPR036873 -
Psa7g0007 410 Gene3D - 53 159 - -
Psa7g0007 410 SMART rhod_4 181 297 IPR001763 -
Psa7g0007 410 Pfam Rhodanase C-terminal 302 379 IPR022111 -
Psa7g0007 410 Pfam UPF0176 acylphosphatase like domain 65 156 IPR040503 -
Psa7g0007 410 Pfam Rhodanese-like domain 195 292 IPR001763 -
Psa7g0007 410 ProSiteProfiles Rhodanese domain profile. 197 300 IPR001763 -
Psa7g0007 410 Gene3D - 172 322 IPR036873 -
Psa7g0007 410 PANTHER THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2 59 408 IPR020936 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g0007 Psa-Chr7 271831 277237 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g0007 63 406 Sulfurtransferasese or Rhodanese AT1G17850 64.560 1.53e-173 491
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g0007 - - mtr:MTR_3g006290 654.44