Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g5593 ATGGAGAAATTGTGGAGCTTCTCGTCAAGATCCAATAGTAATATTGTTGGAACTGATAAGCTACAATTGGAAGAAGAAGAAGAAGAGGACAATCTCCATAACCAATTAGATGATACCATCCCCCTCTCACAAGTTTTACAAGATGTCGATTCTTTTCTCAATAACACAACAACAACAACTCCACATGAAGTTCCCAATTGTGTTGTCGTGTTGCACAAATTGTTGGAGTCTATGATAGATAAATACAATAAACTAACAAGAGGAACAACAAGAATTAACTTGGGGCAAGATCCAGAGAATGACAAGTCTTTTCTAGATGCGGTCCAACGTATCTACAATCTCTCTATCACCTCTACTTTGACTCATCCCTATTCAGACAAAACATGCTTCATCCTAGATAAAGCAATGTTTCTTTTAGAAAATGACATTTGTGCTCTTCTACAACGTCCCAAATCCAAAACATTCAGACCAACATCAACACCAACACCACCGCCTAAGAAATCCGCCTCCTCCGGTTCCCTTCAGCTACATTTTCAACTTCAAGACGACAGGGATTCCTTAAGGGATGACGACCATGACGACGACGACGGTGACTTATTGCCTAATTTCTCATTACATGAAATTTCCATTATGAATAATATTGCCACTTCCATGATTACCGCAGGCTACCATACAGAATGTTGCATGGCCTTTACCGTTTTCAGGAGAAACTCTTTCAAAAATGTGTTGCGAAAATTGGGTTACACGTTTCCAAGGATGGACGAGGTTTATAAAATGCAATGGGAGACGCTGGAAGGCGAGATCGGGACATGGAACAAAGTGTTTCGGCACTGCACCAATGTCCTCTTCAAGACCGAAAGAAAGTTATACGATACAATATTCTCCAACCAACCTTCTCTTTCTCGGACCATGTTTGGGGATCTTGTTCGAATTGTCATCCTCCATTTTCTGAATTTTGCACAAGCAGTGGTTTTGAACAAGCCATCGCCGGAGAAACTGTTCAAATTCCTAGACATGTACGAGACCTTGAGAGATGAGCTGGAGCCGATCATTGTACTCATGAAGGAGGAGGGTTTAGAGGAATGTGCGGAGGATTTGACGTACGAGACATCCGCAACAAAGCACGGGATCATGAATGTTGTTGTGGCAATGTTCTATGATTTGGAAAACTCCATCAAGGGTGATAATCATAGAATTCCTGTCCCTTACGGTGCCATTCATCCATTGACTCGTTATGTCATGAATTACCTTAAATATGCATGTGAATACAAAGCAGCGTTGGAGGAGATATTTTCCCAATATTATACAGATCAAGAATTGGATAGGACGCCGGAGAAATCGCCTTTTGTGGTTCAGCTGATGACAATCGTGGATCTTTTAGATGAAAATACAGAAAGGAAATCCAAGTTATATAAGGATATGGCTTTGCGTTGTGTATTTCTAATGAACAACGGGAGATACATAGTGCAGAAGATCAAAGGGTGCGTTGATCTTCACGAGTCGATGGGAGATAATTGGTGTAGAAGGAGACAAACAAGTTTGAAGATGCATCATAAAAGTTATCAAAGAGAGACATGGAGTAACGTGTTGAAGTGCCTTAACCCGGATGGGCTTCACCAGCAAGGAAACAAGGTGTCTAAGCAGGTATTGAGAGATAGGTTTAAGGGTTTCAATTCGATGTTTGAAGAGATACACAAGACACAGAGCAGTTGGATGGTGAGTGATGAACAGCTTCAATCCGAGTTGAGGGTTTCAATATGTGCTTTGGTCATACCAGCATATCGCTCCTTTTTGGGAAGATTTAAGCATTATCTAGAATCTGGTAGACATGTTGATAAGTACATTAAGTATCATCCTGACGACATAGAAATTTTGATTGATGATTTTTTTGTAGGAAATGCCACGTCCCTGGCTCGAAGGAAGACATGA 1929 0.4085 MEKLWSFSSRSNSNIVGTDKLQLEEEEEEDNLHNQLDDTIPLSQVLQDVDSFLNNTTTTTPHEVPNCVVVLHKLLESMIDKYNKLTRGTTRINLGQDPENDKSFLDAVQRIYNLSITSTLTHPYSDKTCFILDKAMFLLENDICALLQRPKSKTFRPTSTPTPPPKKSASSGSLQLHFQLQDDRDSLRDDDHDDDDGDLLPNFSLHEISIMNNIATSMITAGYHTECCMAFTVFRRNSFKNVLRKLGYTFPRMDEVYKMQWETLEGEIGTWNKVFRHCTNVLFKTERKLYDTIFSNQPSLSRTMFGDLVRIVILHFLNFAQAVVLNKPSPEKLFKFLDMYETLRDELEPIIVLMKEEGLEECAEDLTYETSATKHGIMNVVVAMFYDLENSIKGDNHRIPVPYGAIHPLTRYVMNYLKYACEYKAALEEIFSQYYTDQELDRTPEKSPFVVQLMTIVDLLDENTERKSKLYKDMALRCVFLMNNGRYIVQKIKGCVDLHESMGDNWCRRRQTSLKMHHKSYQRETWSNVLKCLNPDGLHQQGNKVSKQVLRDRFKGFNSMFEEIHKTQSSWMVSDEQLQSELRVSICALVIPAYRSFLGRFKHYLESGRHVDKYIKYHPDDIEILIDDFFVGNATSLARRKT* 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g5593 642 PANTHER EXOCYST COMPLEX PROTEIN EXO70 29 633 IPR004140 GO:0000145|GO:0006887
Psa6g5593 642 MobiDBLite consensus disorder prediction 154 174 - -
Psa6g5593 642 Pfam Exo70 exocyst complex subunit 271 627 IPR046364 GO:0000145|GO:0005546|GO:0006887
Psa6g5593 642 Gene3D Exocyst complex component Exo70 77 640 - -
Psa6g5593 642 SUPERFAMILY Cullin repeat-like 78 630 IPR016159 -
Psa6g5593 642 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 29 633 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g5593 Psa-Chr6 480396602 480398963 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g5593 75 641 EXO70 exocyst subunit family AT5G13150 44.108 9.00e-168 493
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g5593 K07195 - mtr:MTR_1g117090 890.952