Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g5589 ATGGGAATGAGAGATTTTCGTATCAAAATCAAGGCTTTGAGAGTGAAACTTTCATGTTTAGGAAAAAGAAGCACGAGAAGAAATCATGAAGTTGCAGGCAAACCTTCGTGGATGACGCCGATATCGCACGGTCATCATGCGGTGAAGCATGATTTGTTTGAAGGTGATGATTCTGATGATTATGAATTTGATTCAGTTGTGGTACAGAGAGAGCAAATTGGAGATGCGGAATTGTGGTATTTCGGAATTTTTGATCCTGTGATTGGAGATTGTGTTACCAAGTATTTGAAGTTTAACTTTTTTGACAAGAAGCTCAAAGAGACTCATTTGGCAAGAAAAGCCAAAGAAACACTCAAGAGAGCATACCTAGGTGCAAAAGCAAAGATCAGAGAAACACAAAAATCAGAGGAAAGTTGCTTGATAGGTTCAACATCAGTGATGATAATAAATGGAGAAAAACTTGTACTAGCCAACATAGGAGATTACAGAACTGTTTTGTGTAAAGATGGTGTAGCTCATCAGACACATGGAAGATACAATCATCCATCAGCCAAGAAACATTGGTATCACAGACTCTTTTCAGGTGGTAATGCAACTGCTACAAAGTATTCTAAAGCTTCGGAACTAGTCGTTGGAGGTTACTACCGGATCGACTCGTCTACCGAGTTTGTGATCTTAGCAAGCAATGGAATATGGGAGGTGATGAAGAACCAAGAGGCGGTGAATCTTATCAGGCACATCGAGGATCCACAAGAAGCAGCTGAGTGTCTGGCTAAGGAAGCATTGGTTAGGAGGAGCAAAGGAAACATTTCATGTTTAATCATTAGATTTGATTGA 837 0.399 MGMRDFRIKIKALRVKLSCLGKRSTRRNHEVAGKPSWMTPISHGHHAVKHDLFEGDDSDDYEFDSVVVQREQIGDAELWYFGIFDPVIGDCVTKYLKFNFFDKKLKETHLARKAKETLKRAYLGAKAKIRETQKSEESCLIGSTSVMIINGEKLVLANIGDYRTVLCKDGVAHQTHGRYNHPSAKKHWYHRLFSGGNATATKYSKASELVVGGYYRIDSSTEFVILASNGIWEVMKNQEAVNLIRHIEDPQEAAECLAKEALVRRSKGNISCLIIRFD* 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g5589 278 SMART PP2C_4 47 275 IPR001932 -
Psa6g5589 278 PANTHER ALPHABET, ISOFORM E-RELATED 6 277 - -
Psa6g5589 278 Pfam Protein phosphatase 2C 217 270 IPR001932 -
Psa6g5589 278 Pfam Protein phosphatase 2C 79 175 IPR001932 -
Psa6g5589 278 ProSiteProfiles PPM-type phosphatase domain profile. 60 277 IPR001932 -
Psa6g5589 278 PANTHER PROTEIN PHOSPHATASE 2C-LIKE PROTEIN 44-RELATED 6 277 - -
Psa6g5589 278 CDD PP2Cc 64 277 IPR001932 -
Psa6g5589 278 SUPERFAMILY PP2C-like 70 278 IPR036457 -
Psa6g5589 278 Gene3D - 210 278 IPR036457 -
Psa6g5589 278 Gene3D - 45 191 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g5589 Psa-Chr6 480164400 480166605 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g5589 1 277 PP2C-type Phosphatase Gene Family AT3G23360 44.876 1.46e-71 219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g5589 K19704 - gmx:100794054 391.349
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g5589 6 480164400 480166605 Psa6g5589 6 480164400 480166605 ECH