Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g5558 ATGGAGTATTATAGTGTTGTGGGTTTGGTATTAGTTCTTATGGTATGTATGATGAAACTTGGAAGGATGAAACTTGGTCATCATCATCAGCTACCGCCTGGGCCGAGATGTTGGCCCCTGGTTGGCAACATTTTTCAGATAGGTATGTCATCATCGTCGCCGCACGAGGCCTTTGCAATACTTGCTCGCAAACATGGTCCTATCATGACTCTCTGGCTAGGTTCAATGTGCACTGTCGTTATCTCCTCCAGTGACGTAGCCCGTGATATGTTTAAAAACAATGATGTCGCTCTTGCTGGAAGGAAGATTTATGAGTCCATGAAAGGGAATCATGAATATGGTAGTGAAGGTTCGCTCATAACTTCTCAATACAACGAGCACTGGCGCATGCTGAGACGCTTGAGCACCACCGAGTTCTTTGTGACTAGTCGCTTAGACGCCATGCGAGACGTGCGTGCAAAATGTATAGACCGCATGGTGAACTTGATAACTGAAGCTTCTGGCGATGGCGATGGCGAGTCTAGCGTTGATGTTGGAAAATTCTTTTTCTTGATGGCTTTTAACCTCATTGGGAATCTTATTTTTTCAAAGGATTTGTTAGACTCTGAAATGGAGAGAGGAGGTAGATTCTATTACCATGCTGTTAAGGTTATGGAATATGCTGGGAAACCCAACGTTGCAGATTTCTTTCCTATATTGAAGTGCCTTGACCCTCAAGGTATAAGGAGAAACACACAGTTTCATGTTGACAGAGCCTTTGAGATAGCAAGATCATTCATCAAACAAAGGATGGAAAATGACACTGCAGACAGTGGAAACAGCAAAGATTTCTTAGATGTGCTTTTGCAGTTTCGTGGCGATGGCGTCAGTGGCCCCTACGATTTTACTTCAAGAACTATAAACGTTGTTGTCTTTGAAATGTTCACTGCAGGGACAGATACCACAACAAGCACACTAGAATGGGCTATGGCAGAACTTCTGAACAACCCAAGAACACTAAAGAAAGTGCAAATGGAAATAAGGAGCAAAATAGGGCGAGATAGGAAATTTGAAGAAAATGACATTGAGAATCTTCCCTACCTTAAAGCAGTTATCAAGGAGACATTGAGACTTCATCCACCTCTTCCTTTTTTGGTTCCTCACATGGCCATGGACTCTTGCAAAATTGGAGACTACTGCATTCCCAAAGAGACACAAGTGTTAGTGAATGTTTGGGCAATTGGAAGGGACCCAAAAATGTGGGATGCTCCCTTATTGTTCTGGCCAGAAAGGTTTATGGAGCCAAATATGGTTGATTACAAGGGGCGTCATTTTGAGTTTATACCTTTTGGCTCAGGTCGTAGAATGTGTCCGGCGTTGCCGCTTGCTTCACGTGTGCTACCACTGGCACTAGGTTCCCTCCTCGACTCTTTTGATTGGATTTTGCCCGATAATCTTAAGCCTGAGGAGATGGACATGACAGAGGGAATGGGGATAACATTGAGAAAAGCTGTTCCTTTGAAAATCATACCTGTGCCTTACAAAAGAACTCCTGTTGCAGTGGCAGGGAAATAA 1554 0.4363 MEYYSVVGLVLVLMVCMMKLGRMKLGHHHQLPPGPRCWPLVGNIFQIGMSSSSPHEAFAILARKHGPIMTLWLGSMCTVVISSSDVARDMFKNNDVALAGRKIYESMKGNHEYGSEGSLITSQYNEHWRMLRRLSTTEFFVTSRLDAMRDVRAKCIDRMVNLITEASGDGDGESSVDVGKFFFLMAFNLIGNLIFSKDLLDSEMERGGRFYYHAVKVMEYAGKPNVADFFPILKCLDPQGIRRNTQFHVDRAFEIARSFIKQRMENDTADSGNSKDFLDVLLQFRGDGVSGPYDFTSRTINVVVFEMFTAGTDTTTSTLEWAMAELLNNPRTLKKVQMEIRSKIGRDRKFEENDIENLPYLKAVIKETLRLHPPLPFLVPHMAMDSCKIGDYCIPKETQVLVNVWAIGRDPKMWDAPLLFWPERFMEPNMVDYKGRHFEFIPFGSGRRMCPALPLASRVLPLALGSLLDSFDWILPDNLKPEEMDMTEGMGITLRKAVPLKIIPVPYKRTPVAVAGK* 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g5558 517 SUPERFAMILY Cytochrome P450 32 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g5558 517 PRINTS P450 superfamily signature 310 327 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g5558 517 PRINTS P450 superfamily signature 363 374 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g5558 517 PRINTS P450 superfamily signature 441 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g5558 517 Pfam Cytochrome P450 32 492 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g5558 517 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g5558 517 PRINTS E-class P450 group I signature 185 203 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g5558 517 PRINTS E-class P450 group I signature 299 316 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g5558 517 PRINTS E-class P450 group I signature 319 345 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g5558 517 PRINTS E-class P450 group I signature 362 380 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g5558 517 PRINTS E-class P450 group I signature 403 427 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g5558 517 PRINTS E-class P450 group I signature 440 450 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g5558 517 PRINTS E-class P450 group I signature 450 473 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g5558 517 PANTHER CYTOCHROME P450 76A1-LIKE 6 510 - -
Psa6g5558 517 PANTHER CYTOCHROME P450 FAMILY 1 6 510 - -
Psa6g5558 517 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 443 452 IPR017972 GO:0005506|GO:0016705
Psa6g5558 517 Gene3D Cytochrome P450 26 509 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g5558 Psa-Chr6 478196109 478197795 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g5558 10 510 Cytochrome P450 AT3G52970 61.346 0.0 610
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g5558 - - gmx:100778988 779.63