Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g5557 ATGTCTCGCAAAGGCAAAAACACCACCGAAGAAGAAGACGAAGACCAACAAGTATTGCGGCGCGTGAAGAGAGAGCGCGTCAATGCCGACGATAACCCCCCGGAGCAGCAAAACTCCTCAATTCGCAGAATCATCCGCTCCGAGTTTCTCAAACTCAAGTCTCTCATCAATGAGAAGAAAGATGATTTGTTAAACGTCGATTCCGACAAATTCGATTCGATTCTGAGCGAATTTGATAAGTTACATGATCAAGTTAAGAAGCCTCGAGAACAGGTTGCAGACGCTGAGGCGCTACTCGATCTTACTCGCAGTTTGGTTGGATCTGTTAAGTCTCTGGTGAACGAAGGTGTTACTCCTTCTCAGTTTGTTTCTTCGTTGATTCAACGCTATGCTCCTTCACCCAACAGTTCTATTGATTGGCAAAAGCTCGGAACTTCTGTTTCCTCTGTTTTTCTCACTGTTCATGGATCTTCTACCATGCTTGGTCCCATGGAAAATCAGTTGAAACAGCGCAAAACAATAGTGTCGAGGAAGCGAACGCCTCGTTCAGCTACAACTGATAGGCCTGAACAGCTGGATGATGCCGTTGGAGAGGAAAAAACTGATACTGACAAAAACATGTCAACCATGTTTAACATATTGAGGGAAAATAAAAAGGTTCAGCTTGAACACTTAATTTTGAATAGATTTTCGTTTGCTCAGACAGTGGAGAATTTGTTTGCCCTCTCATTCTTAGTCAAAGATGGTCGTGCTGAGATCAATATGGACAAAAACCATTCACACTATGTTTCGCCAAAAAATGCTCCAGCTGCCAATGCTGTAATGTCAAAAGAAGTTTCTTATACTCATTTTGTTTTCAGATATGATTACAATGATTGGAAGATAATGAAGGATCTTGTGCCAGATGGCAAAGAGCTAATGCCACATAGAGTTCAACACAGCACTGTGGATGGCTCACAGGAAGAAATGGATGGTGACAATTCCGCGCAAGCTTTGCCTGTCACTCCTATTAGGAAGATATCCCGGAACCGAGGGCGGGTTTTGCAGGAGGAAAGTGTTGTTGAAGAATCTCCTGAATGTGATGATGAAGATACTTCTAGAGAGGCTGCAATCCGAAGGTGTAAGCGGAAACTCCATTAA 1140 0.4325 MSRKGKNTTEEEDEDQQVLRRVKRERVNADDNPPEQQNSSIRRIIRSEFLKLKSLINEKKDDLLNVDSDKFDSILSEFDKLHDQVKKPREQVADAEALLDLTRSLVGSVKSLVNEGVTPSQFVSSLIQRYAPSPNSSIDWQKLGTSVSSVFLTVHGSSTMLGPMENQLKQRKTIVSRKRTPRSATTDRPEQLDDAVGEEKTDTDKNMSTMFNILRENKKVQLEHLILNRFSFAQTVENLFALSFLVKDGRAEINMDKNHSHYVSPKNAPAANAVMSKEVSYTHFVFRYDYNDWKIMKDLVPDGKELMPHRVQHSTVDGSQEEMDGDNSAQALPVTPIRKISRNRGRVLQEESVVEESPECDDEDTSREAAIRRCKRKLH* 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g5557 379 MobiDBLite consensus disorder prediction 1 40 - -
Psa6g5557 379 PANTHER NON-STRUCTURAL MAINTENANCE OF CHROMOSOMES ELEMENT 4 6 378 - -
Psa6g5557 379 MobiDBLite consensus disorder prediction 174 201 - -
Psa6g5557 379 MobiDBLite consensus disorder prediction 1 31 - -
Psa6g5557 379 PANTHER UNCHARACTERIZED 6 378 IPR027786 GO:0005634|GO:0006281|GO:0030915
Psa6g5557 379 Pfam Nse4 C-terminal 220 301 IPR014854 -
Psa6g5557 379 MobiDBLite consensus disorder prediction 181 201 - -
Psa6g5557 379 MobiDBLite consensus disorder prediction 310 379 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g5557 Psa-Chr6 478192959 478195768 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g5557 5 378 Non-SMC Element family AT1G51130 48.855 1.57e-122 358
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g5557 K22825 - gmx:100792117 510.375