Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g5543 ATGTATCGTCCTCCTTCGTCTTCTGGTTCTTCTTCTTCCTCTTCTCAGCAACAACAGAGCTCCATAAGTCAAACAGGTCTCACAAGATACGGTTCTGCACCCGGCTCTCTCCTCACCAGCACCGTCGATGCTGTTCTAGCAGGATCGCGCCTTCTCCCGGGGACTGGACATTATTTCTCCGGCGACTCCGCTCACCAGCAACACCACCAACACCAGCAGCAACAACAGCAACAGCAACAGCAGAAATCTTCTTACGAAGGCTTTGATGGATCGTCTTTGGTCCGTCAGAAAAGCTCTCCCGCCGGTTTCCTCAACCATCTGGCCACTCTCAATCATAATAATAGCGCGGGGTTCACAATCACGCGAGGCGGAAATGGAGGATCGAGATTGAAGTCTGAATTGAGCTTCACGGGAGGAGGACAAGGGCAAGAATGTCTTTCTAGAATATCCGAAAATAGTGTTGATTATGCTGCAGCAGTAGCGGGAGGAAATGGATCATTGCATAACAGTAACTGGGGTGGAGGATCTGATAATAATAATAATAATAATAACAATAATAACAATAACAATTCAAATTCTATAGTATTTTCTTCTTCTGTTTCTCAAAATCAATCTAATAATAAGCGTTCGAGTAGAAACGACGACGATCCCGACCTTCTTCTTCATTGCCTCAACGCCCTCGAAACTCAGTATAGTCTCCCACAAACTTCTATGGAAATGGACAAGCTTATGCATATTCCTCAAGATTCCGTCCCTTGTAAAATCCGCGCTAAGCGTGGCTGTGCCACTCATCCTCGAAGCATTGCTGAACGGGTTATAACTCTACTCTGTCATTTTTCTTTCTGTTTCTATTTCAAATACTATATGTATATACATATCAACTCTATTGCATTGCATATATGTAGGAGAGAAGAACTAGAATAA 924 0.4383 MYRPPSSSGSSSSSSQQQQSSISQTGLTRYGSAPGSLLTSTVDAVLAGSRLLPGTGHYFSGDSAHQQHHQHQQQQQQQQQQKSSYEGFDGSSLVRQKSSPAGFLNHLATLNHNNSAGFTITRGGNGGSRLKSELSFTGGGQGQECLSRISENSVDYAAAVAGGNGSLHNSNWGGGSDNNNNNNNNNNNNNSNSIVFSSSVSQNQSNNKRSSRNDDDPDLLLHCLNALETQYSLPQTSMEMDKLMHIPQDSVPCKIRAKRGCATHPRSIAERVITLLCHFSFCFYFKYYMYIHINSIALHICRREELE* 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g5543 307 MobiDBLite consensus disorder prediction 62 88 - -
Psa6g5543 307 PANTHER TRANSCRIPTION FACTOR BHLH129 26 271 - -
Psa6g5543 307 MobiDBLite consensus disorder prediction 1 28 - -
Psa6g5543 307 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 26 271 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g5543 Psa-Chr6 477302041 477304572 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g5543 26 271 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G05805 34.314 3.19e-29 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g5543 - - mtr:MTR_1g116790 311.227
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g5543 6 477302041 477304572 Psa6g5543 6 477302041 477304572 ECH