Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g5502 ATGGATTCCAAAAACACAGAACCATCATTTCCTCATCCTCTTCCTCTAGAATCCAACATGAACACTGAGGATACCAAATTGGTATATGGTAGTCATGCTCCTGGAATCCGAAAAGCAATGAAAATTCTTGAAGCTCAATTTTCACATTCAAATGCATCGTCATCATCATCAGTTCATAATGACGAGGATGTCATTAACATTTACAACAACAACAACATGATGATGGATGTTTTTAACGATGTTTATCATCCTAATATCCTCGTCGCAAGATCACCACAGTCATATGAGGCATCATCAGATCAGACAATTGTTGCTCCTATTGATGGTGATGCTTCTGCCGAGGTTCATTTCAAGAAGAAGAATCATGATGATGGTAGAATCCACAGCCTACCACACCAGAAATATGGACCGTACACGTGTCCAAAGTGCTACCAAGTGTTGGGTACTTCACAAAAATTTGCTTCTCATGTGACGTCAAATCACTACAAGTTTGATAGTGTGGAGGAGAAAAAAAAGAGATACATGTCAAGAATAAGGAAGAAAACAAGTCTCCAGATTCGGGAGCTCGATAACGAACAAACTACTTTTGTTCCTGCTGTTTCATCTATTGATCAGCCCCTTGTTACTTCTATAGCTAATAATGATGATCAAAATCAAAGTTCTCCTTTGGCACTTTCTCTCATTGATGTTAAAATCGAATTGGATCTTTTGGATGGTTAA 720 0.3819 MDSKNTEPSFPHPLPLESNMNTEDTKLVYGSHAPGIRKAMKILEAQFSHSNASSSSSVHNDEDVINIYNNNNMMMDVFNDVYHPNILVARSPQSYEASSDQTIVAPIDGDASAEVHFKKKNHDDGRIHSLPHQKYGPYTCPKCYQVLGTSQKFASHVTSNHYKFDSVEEKKKRYMSRIRKKTSLQIRELDNEQTTFVPAVSSIDQPLVTSIANNDDQNQSSPLALSLIDVKIELDLLDG* 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g5502 239 ProSitePatterns Zinc finger C2H2 type domain signature. 140 161 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g5502 Psa-Chr6 475069489 475071179 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g5502 124 193 C2H2 Transcription Factor Family AT5G22990 56.757 1.72e-21 89.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g5502 - - mtr:MTR_3g084720 139.813