Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g5462 ATGGGCTTGGATTTTCCTTACTCTGTCCAAATAACCGCTGATAATCTCCCTCCTGAAATCACAACTTTGATCGGTGAAGACGTTGGAAATATTGCAAAACTTGCCACTGTTCTTCTAATTCACAAGAATTTCGGCCAGGATTCTGAATGGCATCCTTATATCAGCTGTCTTCCACCACAGGGGAAGATGCATAATACTATATTTTGGAATGAAAGTGAGTTGGAGATGATTCACGGAAGTTCAGTTTATCAGGAAACTGTTTATCATAAGTCTCAAATTGAGAAGGACTTTCTGGCAATCAGGCCTGTTCTTAAATCATTTTGTCAAAGTTTTGGAGATTTTACTTGCAAGGACTTCATGCACGCATGTACACTAGTTGGCTCTAGAGCATGGGGAGGCACAAAGGGTTTATCTCTGATTCCATTTGCAGATTTCTTAAATCATGATGGGATTTCAGAAGCCATTGTAATGAGTGATGATGACAAACAATGCTCAGAAGTTACTGCTGATCGGGATTATGTTCCTGGTGAACAGGTACTTATAAGATATGGAAAGTTTTCAAATGCTACATTGATGCTGGACTTTGGTTTTACAATTCCCCACAACATTTATGATCAGGTTCAGATCCAGCTTGATATACCTAAGCATGATCCTCTGCATGGCATGAAATTGGACCTCTTACAGCAATACTTTGTTCCACAGGCCAACGATGCAAAAAGCTTGAAGTGTTCCGTGAATTCCTTCACAATCAACAAAGTATTTGATATCAATTGCTTCCCCTTTCAATCAACATTTGGCTTGTCCAATGACCCCAGAGCTACGAATCTCGGTGGTTAA 837 0.399 MGLDFPYSVQITADNLPPEITTLIGEDVGNIAKLATVLLIHKNFGQDSEWHPYISCLPPQGKMHNTIFWNESELEMIHGSSVYQETVYHKSQIEKDFLAIRPVLKSFCQSFGDFTCKDFMHACTLVGSRAWGGTKGLSLIPFADFLNHDGISEAIVMSDDDKQCSEVTADRDYVPGEQVLIRYGKFSNATLMLDFGFTIPHNIYDQVQIQLDIPKHDPLHGMKLDLLQQYFVPQANDAKSLKCSVNSFTINKVFDINCFPFQSTFGLSNDPRATNLGG* 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g5462 278 Gene3D - 199 256 IPR036464 -
Psa6g5462 278 Gene3D set domain protein methyltransferase, domain 1 3 197 - -
Psa6g5462 278 SUPERFAMILY SET domain 5 202 IPR046341 -
Psa6g5462 278 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 3 252 - -
Psa6g5462 278 Pfam SET domain 33 184 IPR001214 GO:0005515
Psa6g5462 278 PANTHER OS01G0976450 PROTEIN 3 252 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Psa6g5462 SET 7.6e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g5462 K19199 - gmx:100818002 397.512