Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g5372 ATGGAAGAGATGCTGAGTTCATCAACAACAACAATCAACTCTTCCAATATAGGGTTTCAGCTATTGAAGAAGCAGGGTTGGAAAGAAGGCACTGGCCTTGGGATCTCTGAGCAGGGTAGATTAGAACCTGTTGAAACTCATGTGAAGAATAATAAGCGCGGTTTGGGAGCAGATAAAGTGAAGAAAAAGATAGTGAAACCTGATCATGGTGCTGATTCCTCTAAAGGAGACAATAAGCAGGAACATTTGTCTAAAAAGAAAACCAAAGCACTTTCTAAACGGGTGAGAAAGATGCAGGAGTTAGAAAAGAAGATGCAGGAGAAGGAATTTGAGCGCGCTTTCTTTAGAGAGTTCTGGCCTGACAATGTATGA 372 0.414 MEEMLSSSTTTINSSNIGFQLLKKQGWKEGTGLGISEQGRLEPVETHVKNNKRGLGADKVKKKIVKPDHGADSSKGDNKQEHLSKKKTKALSKRVRKMQELEKKMQEKEFERAFFREFWPDNV* 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g5372 123 MobiDBLite consensus disorder prediction 46 99 - -
Psa6g5372 123 Coils Coil 91 111 - -
Psa6g5372 123 Pfam G-patch domain 15 57 IPR000467 GO:0003676
Psa6g5372 123 ProSiteProfiles G-patch domain profile. 14 60 IPR000467 GO:0003676
Psa6g5372 123 PANTHER BAT4 PROTEIN-RELATED 5 123 IPR039146 -
Psa6g5372 123 SMART G-patch_5 12 58 IPR000467 GO:0003676
Psa6g5372 123 MobiDBLite consensus disorder prediction 46 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g5372 Psa-Chr6 469292881 469297370 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g5372 6 56 C2H2 Transcription Factor Family AT5G26610 49.020 3.03e-10 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g5372 - - cam:101497292 206.453