Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g5299 ATGAAACTTTCAGCATTCCCCAACTTCAAACTTGTTTCTAATTCTTCCCTATTCCATTCTACCTCGAATCAATTTCGCTCTCGATGCTCTCTTTCTCTTCGTCACTGCCATTATGGCTTTCGGTGTCGAAATTCAAAACCTGTACCGCAGATCAGGATGTGTTCGGAGAAGCTTCCGCTGTCGAACGGTTACGGCGGAGTCGATATCCGAGAAACCAAATCCGATTTCGTCGAAGTGATTGCCATTGGCGGTAGGAAGGACGCGGTTCTTGATTTCTGCTTGAATTCGCCATTTCAGTTGTCTTCTTTACGCTTTTGGAATGTCATTGTAAAAGATTCACAAGATGTGCAATTACAACAAAGGCCTACTAAAGAAGAACCTTGCTCCGGAATTGTCAAAGCTCCAGTATTTATGAAGTCATGCTCAAAGACCATTGTCCTTGTGGCTAGTGCAGGATATGGATCAGACCACACCGTCACCGTTGATATTTTTGAAACTATAAGGTCCACAAATGGACTCACAGTTGCTGTAGTTTTGAAGCCATTTAGCTTTGAAGGGTTGAGACGAAAAGATGAGGTAAAAGCTTTGATGGGGAAACTTAAGGAGAATACTAATTTACTTATCGAAATTGACATTGATGCACTTCTCAAAAAAGACTTGTTGACTCTAGATGAGGCTATGAAGACTGCAAATGATGCTGTTTTGCTAGCTATTAAGGCCATATCAGTTCTAAAATCAGAAATGCACAGAAAATTTATAGATAGATTGCACAATAGCGTGAAAGAAGCCTGCAATTCAGAAATTATTAAAATATTGGAATGCTATAAAGAAGCCAGAATTGGATTTGGGGCTGCTTATAATATCAAAACTTCAATTTTGCAGTCTATATTTGATAGTCCCTTCTTGGGTGCTTCTTTGAAGGATCCAAATAGTGCAGTTATATGCATTATTGCGTGTTCTGAACCCATCAATGATAGTGATATAGCAGTCTTTCTGCATACTTTCCGTCAAACAACAGAATACACGAGGGATATTATAATATCAACAGTACTTGAGCCTGATGTCGAGCCCAACCTACTAATCACAACTGTCCTTACACTTGGCTTAACCGTGCAACCACCTTCCCAGAATGGTGGTATACTATCCAAACTTGCCCGGCATTTTCCTCTTGTATTTAGCTTTTGGGGAAGACATAGTATGCCACAAATTGTCCCTGGGAAAGAGGATGCAGTATCTTCTCATGAAATGATGAGATCTTATAACAGTGATGAGGGGGAAAGTATGGTTATTCCCAGTACTGTTGATGACAGATTTGACAAGCAGTTTGCAGAGCTGGAGCCAGATGTGAGCAACAACAGCTCAAAGTTGTTTGTTTTAAGGGATTCTGAAGAAAATGAAGATTCATTTGACAACATAGCCAATTCTCCTATCCTTTATGATTCCATTAACGAAGAAGACGAATTTGCTTTTCAGAGGGAACAGCTTGGAAACTGGAATCTGGGCCCTGGATTTGAAGTGGCAAAAGAGTGGGCCCAAGAAACGGAAGCTGATGTTACACCAGTGGTTGATAGCCTAAGCATATTCCACCTTCCTGTTGGTGTGAGGCCTTTAGAAGAGTTGAAAGACAGTTTAGAAATCTCATTTATGTCAAAAAAGCACGAGCCAGATGCAGGTGTGGAAGCAATGATGGAATTTACATCTTCACTTTTGAAGGCAAAACGTGCTAATAGTAATAAGCCAAAGAAGCATGGTGTTCTGTCTGTTCGTGCTGCATCTATGCTGGAGGCAGAACGCGATATGTCAATAAAGTGGAGTCGTGTTGTGGAAATACAATATAGGGGAGGAAGATACAAGGGACGATGCCAAGGTGGTATTCCTGAAGGGAAGGGGCGTCTTGTTCTTCAAGATGGAAATATCTATGACGGTTTATGGCACACTGGCAAGAGGTCAGGTCCAGGAACATTCTATTTCAAGAACGGAGACATGTTTCAAGGATCGTGGAGGGATGACGCCATGCACGGCAAGGGTTGGTTTTATTTTCACACTGGTGATCGGTGGTTTGCAAACTTCTGGAAGGGAAAGGCAAATGGAGAGGGGCGGTTTTACACAAAGTCTGGTGATGCCTTCTTTGGCAATTTCAAAGACGGATGGCGGCATGGCCAGTTTCTTTGTGTGAATGCAAATGGAACGAGGTACATTGAAATTTGGGAACACGGAGTTCTTGTAGACAGCAAGCCTTTAGACAGATGA 2250 0.4187 MKLSAFPNFKLVSNSSLFHSTSNQFRSRCSLSLRHCHYGFRCRNSKPVPQIRMCSEKLPLSNGYGGVDIRETKSDFVEVIAIGGRKDAVLDFCLNSPFQLSSLRFWNVIVKDSQDVQLQQRPTKEEPCSGIVKAPVFMKSCSKTIVLVASAGYGSDHTVTVDIFETIRSTNGLTVAVVLKPFSFEGLRRKDEVKALMGKLKENTNLLIEIDIDALLKKDLLTLDEAMKTANDAVLLAIKAISVLKSEMHRKFIDRLHNSVKEACNSEIIKILECYKEARIGFGAAYNIKTSILQSIFDSPFLGASLKDPNSAVICIIACSEPINDSDIAVFLHTFRQTTEYTRDIIISTVLEPDVEPNLLITTVLTLGLTVQPPSQNGGILSKLARHFPLVFSFWGRHSMPQIVPGKEDAVSSHEMMRSYNSDEGESMVIPSTVDDRFDKQFAELEPDVSNNSSKLFVLRDSEENEDSFDNIANSPILYDSINEEDEFAFQREQLGNWNLGPGFEVAKEWAQETEADVTPVVDSLSIFHLPVGVRPLEELKDSLEISFMSKKHEPDAGVEAMMEFTSSLLKAKRANSNKPKKHGVLSVRAASMLEAERDMSIKWSRVVEIQYRGGRYKGRCQGGIPEGKGRLVLQDGNIYDGLWHTGKRSGPGTFYFKNGDMFQGSWRDDAMHGKGWFYFHTGDRWFANFWKGKANGEGRFYTKSGDAFFGNFKDGWRHGQFLCVNANGTRYIEIWEHGVLVDSKPLDR* 750
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g5299 749 PANTHER PROTEIN ACCUMULATION AND REPLICATION OFS PROTEIN 1 749 - -
Psa6g5299 749 SMART morn 615 636 IPR003409 -
Psa6g5299 749 SMART morn 707 728 IPR003409 -
Psa6g5299 749 SMART morn 661 682 IPR003409 -
Psa6g5299 749 SMART morn 638 659 IPR003409 -
Psa6g5299 749 Gene3D - 615 676 - -
Psa6g5299 749 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE RELATED 1 749 - -
Psa6g5299 749 Gene3D Tubulin/FtsZ, GTPase domain 124 368 IPR036525 -
Psa6g5299 749 PRINTS Cell division protein FtsZ signature 172 193 IPR003008 GO:0005525
Psa6g5299 749 PRINTS Cell division protein FtsZ signature 266 287 IPR003008 GO:0005525
Psa6g5299 749 Pfam MORN repeat 710 721 IPR003409 -
Psa6g5299 749 Pfam MORN repeat 640 662 IPR003409 -
Psa6g5299 749 Pfam MORN repeat 622 638 IPR003409 -
Psa6g5299 749 Pfam MORN repeat 663 685 IPR003409 -
Psa6g5299 749 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 614 742 - -
Psa6g5299 749 SUPERFAMILY Tubulin nucleotide-binding domain-like 79 243 IPR036525 -
Psa6g5299 749 Gene3D - 687 745 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g5299 2 748 PP2C-type Phosphatase Gene Family AT1G75010 44.444 0.0 618
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g5299 - - gsj:114371951 1045.42