Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g5267 ATGGCGGTTGAAGGTGTAAGCTCAACGAAGCTATCACAAAGAAACCTCGTAACCCAAGTCATCACCGGACGGTGGTTCGTGGTGTTCGCTTCCTTTCTAATCATGTCCGCCTCCGGAGCCACCTACATGTTCGGTCTTTACTCCGGCGTCATAAAAGAATCCTTAGGCTACGACCAAACAACTCTCAACCTCCTTAGTTTCTTCAAAGACCTAGGTGGAAACCTCGGTGTTTTCTCCGGTTTAATCAACGAAATAACACCTCCTTACGTTGTCCTCGCAATCGGCTCCCTTCTTAATTTCTCCGGCTACTTCATGATATGGTTAGCAGTAACCAAAAAAATATCGAAACCAAAAGTTTGGCAAATGTGTCTTTACATTTGCATAGGTGCGAATTCTCAGTCTTTTTCAAACACAGGCTCTCTTGTGACATGTGTCAAGAATTTCCCCGAAACTCGCGGTGTTGTGTTGGGGATTCTAAAAGGCTATGTTGGTCTTAGTGGTGCTATCATCACACAGCTTTACTCTGCTATTTACTTTAATGACACAAAAGCTTTGATTCTTCTCATTGCTTGGCTTCCGGCTGCAATTTCTTTTCTTTTTCTTCGAACCATTCGGTACATGAAACCGGTTAAACAGAACAACGAGCTGAATGTTTTTTATAAGTTTTTGTATATATCACTTGGTCTTGCTGGTTTTTTGTTAGTCATGATTATACTTCAGAAAAAAGTTTCGTTTAAACAAAGTGAGTATATAGGAAGTGCTTCTGTTGTTCTTATTCTATTGTTTCTACCTCTCGCTGTTGTTTTTGTCGAACAGATGAAGATTCAAAAGGGTAAGGCTCCTTTTGTTGATCCGTTTTCTGTTAAAATAGTAGCTAATCAAGGAGATAATGTCTCACCAACACCACCGACGACAACGAAGACGACGACGAAGACGACGACATCAAAAGAAACAAGATGGTGGGAAAATATTTTTCATCCACCAATACAAGGTGAAGATTTCACAATACTTCAAGCACTTTTCAGCATAGACATGATCTTACTATTCCTCGCCGGGACATGCGGTGTTGGTGGAACCTTAACAGCCATAGACAACCTAGGACAAATAGGAACCTCCCTCGGATATCCAAAAACAAGCATAAGCACATTCGTTTCATTAGTGAGTATATGGAACTACCTAGGAAGAGTTTTCTCAGGTTTTGTCTCGGAATATGTTTTAACGAAGTACAATTTCCCAAGACCACTCATGCTTACATTAACCATGTTTTTATCTTGTGTCGGTCATCTTTTGATAGCTTTTGATGTTGAGAACGGTCTATATTTTGCTTCGGTTATCATTGGATTTTGCTTTGGTGCACAATGGCCACTGGTTTTCGCCATAATTTCGGAGTTATTTGGGTTGAAATATTATTCAACTTTGTACAACTTTGGTGGGGTAGCTAGTCCTATTGGGTTGTATTTTCTTAACGTTAGGGTTACTGGTTTTTTGTATGACAAAGAAGCTAAGAGACAGTTGTTTGAAAGTGGAGTACCGAGAAAAGATGGTAAAGAATTGAATTGTGTAGGGGCAAGTTGTTATAAATTGTCCTTTTTTATTATCACTGGAGCTACTTTGTTTGGTGCCATTATTTCTCTTATTTTGGTGGCTAGAACTATTAAGTTTTATAAAGGGGATATATACAAGAGGTACAGATCGGAAGCGGTGGAGGTTGGAGGTGATACGGCGGAGATGACGGTGGTCCAAAACGGCGGCAAGAGAGGACAAGAATCAAAAATTGTTCGTCCTAATATCTTTGCACGGCTATCAATTTAG 1812 0.4007 MAVEGVSSTKLSQRNLVTQVITGRWFVVFASFLIMSASGATYMFGLYSGVIKESLGYDQTTLNLLSFFKDLGGNLGVFSGLINEITPPYVVLAIGSLLNFSGYFMIWLAVTKKISKPKVWQMCLYICIGANSQSFSNTGSLVTCVKNFPETRGVVLGILKGYVGLSGAIITQLYSAIYFNDTKALILLIAWLPAAISFLFLRTIRYMKPVKQNNELNVFYKFLYISLGLAGFLLVMIILQKKVSFKQSEYIGSASVVLILLFLPLAVVFVEQMKIQKGKAPFVDPFSVKIVANQGDNVSPTPPTTTKTTTKTTTSKETRWWENIFHPPIQGEDFTILQALFSIDMILLFLAGTCGVGGTLTAIDNLGQIGTSLGYPKTSISTFVSLVSIWNYLGRVFSGFVSEYVLTKYNFPRPLMLTLTMFLSCVGHLLIAFDVENGLYFASVIIGFCFGAQWPLVFAIISELFGLKYYSTLYNFGGVASPIGLYFLNVRVTGFLYDKEAKRQLFESGVPRKDGKELNCVGASCYKLSFFIITGATLFGAIISLILVARTIKFYKGDIYKRYRSEAVEVGGDTAEMTVVQNGGKRGQESKIVRPNIFARLSI* 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g5267 603 Pfam Nodulin-like 24 269 IPR010658 -
Psa6g5267 603 PANTHER MFS TRANSPORTER 14 595 - -
Psa6g5267 603 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 14 595 - -
Psa6g5267 603 SUPERFAMILY MFS general substrate transporter 23 552 IPR036259 -
Psa6g5267 603 CDD MFS_Mch1p_like 23 541 - -
Psa6g5267 603 Gene3D MFS general substrate transporter like domains 19 215 IPR036259 -
Psa6g5267 603 Gene3D MFS general substrate transporter like domains 340 555 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g5267 Psa-Chr6 463363687 463366613 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g5267 12 566 Nodulin-like Gene Family AT2G39210 66.487 0.0 756
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g5267 - - gmx:100808975 879.011
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g5267 6 463363687 463366613 Psa6g5267 6 463363687 463366613 ECH