Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g5263 ATGGCCATTAAAATTAACTCTATAGGTGTTCATGGTTGGGGCGACATGAGGAGTCTCACTGTCCAGTTTATAACTGGACGGTGGTTCATCATGTTCGCCTCCTTCTTAATCATGGCAGCCGCCGGAGCTACCTACATGTTTGCCCTATACTCCGGCGACATAAAAACAGCACTTGGCTATGATCAAAGCACACTCAACCTCCTTAGTTTCTTCAAAGATTTTGGTGCCAACGTTGGTATCCTTGCCGGATTTGTGAACGAAATATATCCACCTTGGGTAGTTCTAACCATTGGTGCTATTCTCAATTTCTTTGGTTACTTCATGATTTGGTTATCCGTAACCAAGAAAATAGCAACACCAAAAGTTTGGCAAATGTGTCTTTACATTTGCATTGGTGCTAACTCTCAGTCTTTCGCAAACACCGGTTCACTTGTTACCTGTGTGAAGAATTTCCCCGAGTCTCGCGGCGCTGTTTTGGGAGTTCTGAAAAAGGCTATAGAACAAGATTTGGCGAGTAAGAAACTCGCTTTGGTTGATTCTTCGCCGGTGAAAATAGTAACAGAAGGTGAAATTGCAGAAACTGAAAAAGTCAATGCTGTTCATTCAGTTTCAGTTTTCTCTCCAAAGAAAGATCCAAATGGTATGAAGATGTTGTTTCATCGCACCTGCAAGAGCATTGACATGTTGATACTCTTCGTGGCATGTATCTCCGGTGTTGGTGGAGCGTTAACAGCGATCGATAATCTTAACCAGATCGGAACATCGCTTCGATATCCGAAGAAAAGCATAAGCACTTTCGTGTCATTAGTAAGTATTTGGAATTATCTCGGACGAGTTTTCTCAGGATTTGTTTCAGAATATGTTCTTGTAAAGTACAAATTTCCTCGTCCTCTCATGCTTACTTTGATTCTCTTTATCTCTTGCATTGGACATCTTCTGATAGCATTCGATGTTCCGAGTGGTCTCTACGCAGCATCGGTTATCATCGGTTTTTGTTTCGGTGCGCAATGGCCATTACTCTTCGCCATAATTTCTGAACTTTTCGGACTTAAATATTATGCAACTTTGTATAATTTCGGAAGTGTAGCGAGTCCATTAGGGTTATATGTTCTTAACGTGATGATCACCGGTCATTTATACGACAAAGAAGGTAAAAAACAATTGGAAGCACTCGGACGAACCAGACAAGAAGGACAACAATTGAATTGTGTTGGCGTTGAATGTTTCAAATTGTCTTTCATTATTATTACAGCCGCGACATTTTTTGGTGCGGTTGTCTCACTTATTTTAGTGGCGAGAACAAGAAAGTTTTACAAAAGTGACATATACAAGAGGTATAGAGAAGAAGCTGAAATGGTGGAAGTAAAGAAAAAGGAAGATGCCAAAGCTGATCAACCACATGTGATAACATCTTAG 1416 0.4061 MAIKINSIGVHGWGDMRSLTVQFITGRWFIMFASFLIMAAAGATYMFALYSGDIKTALGYDQSTLNLLSFFKDFGANVGILAGFVNEIYPPWVVLTIGAILNFFGYFMIWLSVTKKIATPKVWQMCLYICIGANSQSFANTGSLVTCVKNFPESRGAVLGVLKKAIEQDLASKKLALVDSSPVKIVTEGEIAETEKVNAVHSVSVFSPKKDPNGMKMLFHRTCKSIDMLILFVACISGVGGALTAIDNLNQIGTSLRYPKKSISTFVSLVSIWNYLGRVFSGFVSEYVLVKYKFPRPLMLTLILFISCIGHLLIAFDVPSGLYAASVIIGFCFGAQWPLLFAIISELFGLKYYATLYNFGSVASPLGLYVLNVMITGHLYDKEGKKQLEALGRTRQEGQQLNCVGVECFKLSFIIITAATFFGAVVSLILVARTRKFYKSDIYKRYREEAEMVEVKKKEDAKADQPHVITS* 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g5263 471 Pfam Nodulin-like 27 163 IPR010658 -
Psa6g5263 471 SUPERFAMILY MFS general substrate transporter 27 161 IPR036259 -
Psa6g5263 471 SUPERFAMILY MFS general substrate transporter 190 437 IPR036259 -
Psa6g5263 471 Pfam Major Facilitator Superfamily 231 446 IPR011701 GO:0022857|GO:0055085
Psa6g5263 471 Gene3D MFS general substrate transporter like domains 220 440 IPR036259 -
Psa6g5263 471 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 10 165 - -
Psa6g5263 471 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 178 470 - -
Psa6g5263 471 PANTHER MFS TRANSPORTER 10 165 - -
Psa6g5263 471 PANTHER MFS TRANSPORTER 178 470 - -
Psa6g5263 471 CDD MFS_Mch1p_like 26 424 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g5263 Psa-Chr6 462669946 462671724 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g5263 172 449 Nodulin-like Gene Family AT2G39210 62.671 3.89e-122 367
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g5263 - - gmx:100819661 415.616
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g5263 6 462669946 462671724 Psa6g5263 6 462669946 462671724 ECH